Acropora digitifera (stony coral): 107343083
Help
Entry
107343083 CDS
T04352
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
adf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107343083
09124 Replication and repair
03420 Nucleotide excision repair
107343083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107343083
03400 DNA repair and recombination proteins [BR:
adf03400
]
107343083
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107343083
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107343083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
C1_2
DZR_2
Motif
Other DBs
NCBI-GeneID:
107343083
NCBI-ProteinID:
XP_015764126
LinkDB
All DBs
Position
Un
AA seq
389 aa
AA seq
DB search
MCISKMANEEEGGYRWLSQYERTWEVIQEDAEGSLQTVVDEISHRSKRRRIMGRSGNIRL
GMMRHLFIVVDMSRAMEEADLKPSRLACSVKLLEDFISEYFDQNPISQVGLIVTRNKRAE
KITELSGNPQLHIGCLQKAASKACTGEPSLQNAIDSAVRSLRHMPGHASREILILFGSLT
SCDPGDIEETVQTLQRQNIRCSIIGLAAEVRVCRRICSETQGSYGVILDERHYRDLLMQH
VVPPVAKADTEAALIRMGFPQHLSSGPPSMCMCHLDDSGGVKGFGTSGYFCPQCKSKYCD
LPVECKVCGLILVSAPHLARSYQHLFPLAQFTEIDLTVVEYEQHQSPRLCFACRRELTEK
VAYSCPQCGQVFCVDCDIFIHDSLHSCPG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatatccaagatggctaacgaagaggaaggaggatatcgttggctaagtcagtat
gaaaggacttgggaggttatccaagaggatgcagaaggatcccttcaaacagtggttgat
gaaatatcacacagatccaaaagaagaagaatcatgggaagaagtgggaatattcgactt
gggatgatgcgtcatttgtttattgttgtggatatgtctcgagccatggaagaagctgac
ctcaaaccttctcgtcttgcttgttctgtcaagctgttggaagacttcatctctgagtac
tttgatcaaaatccaatttcacaggttggacttattgtaaccaggaacaagagagctgag
aaaattactgaactaagtgggaacccacagctccacattggctgcctccagaaagctgct
agcaaagcatgtacaggggaaccctctttacaaaatgcaattgattctgctgttcggtca
ctgcgacacatgcctggtcatgccagtcgagaaatactcattctgtttggaagtctaacc
tcgtgcgatccaggagacattgaggagactgttcagacccttcagcgacagaacatcaga
tgttccataattggcctggcagctgaagtgcgagtttgcagaagaatttgttctgaaacg
cagggtagttatggcgtgattttagatgaaagacactaccgagacttgttaatgcaacac
gttgtacctcctgtggccaaagccgacacggaagctgctctaatacgaatgggattccct
cagcatctttcaagcggtccaccatctatgtgcatgtgtcatttggatgacagcggaggt
gtaaaaggtttcggaacgtcaggctacttttgtcctcagtgtaaaagcaagtactgcgat
ttacctgtagaatgtaaagtttgtggtctaatattagtatcggctcctcatctcgctcgc
tcatatcagcatctcttcccgctagctcagtttacagaaatagatttgacagttgtggag
tatgaacagcaccaaagtccaagactttgcttcgcttgtcgcagagaattgacggaaaaa
gtcgcttactcgtgtccgcagtgtgggcaagtcttttgtgtagactgtgacatcttcatt
cacgactctcttcacagctgccctggttga
DBGET
integrated database retrieval system
