Acropora digitifera (stony coral): 107350513
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Entry
107350513 CDS
T04352
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107350513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adf03041
]
107350513
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107350513
Spliceosome [BR:
adf03041
]
Complex A
U2 snRNP components
U2 related factors
107350513
Complex B
107350513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107350513
NCBI-ProteinID:
XP_015772225
LinkDB
All DBs
Position
Un
AA seq
679 aa
AA seq
DB search
FTYLQYSSEDEVEEETIESTYANFKTKKKKDLQAVDHDKVYYSSFRKNFYVEVPELARMT
EEEVDEFRSKLENIRVRGKDCPKPVKTWAQTGVSLKLLDVLKKNNYEKPTPIQAQAIPAI
MSGRDLIGIAKTGSGKTLAFLLPMYRHVVDQPELERDDGPIAVIMTPTRELALQIYRECR
KFCKPLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGNFVLVFRCNKI
SLDEADRMFDMGFEPQVMRIIDCIRPDKQTVLFSATFPRQMESLARKILDKPVEIQVGGR
SIVCSDVQQNVVVIDEDDKFLKLLELLGIYQEQGSILVFVEKQEKADMLFKDLLRRSYPC
LSLHGGMDQFDRDSTIADFKNGVTNLMIATSVAARGLDVKQLILVINYDCPNHYEDYVHR
CGRTGRAGRKGTSFTFVTSEQGRHAGDVIKALESSAAEVPEELRKLWNDYIEERKAEGKN
VVKNSGFTGKGFKFNDEEAAKVNEAKKLQKWNLGLQDSDDEAEAEEKAMEEINQQLDRAF
EGKPHIKKAVPVVSGEQIKGDQKEKLNLATSIAAKINQKIIAGTNVSASCVIALTSLAWT
ETIMNITEVSEAAITVRGTFFPPGKEPKEGERKIYLYIEGPSERSIHLAKIEVKRVVKEE
MIRLGSFRGPQSSGRYKVL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
tttacctatttacagtattcatcagaggatgaagtggaggaagaaactattgagtcaaca
tatgcaaattttaaaaccaagaagaaaaaggatctccaggcagttgaccatgataaagtg
tattactcctcctttcggaaaaacttttatgttgaagtccctgaacttgcaagaatgact
gaagaagaggttgatgaattcagaagcaagcttgagaacattcgtgttcgtggcaaggac
tgtccaaaacctgtgaagacctgggcacaaacaggagttagcctaaaacttttggatgta
ctaaaaaagaacaactatgagaagccaacaccaattcaagctcaagcaataccagctatc
atgagtggccgagatttgataggtattgcaaagactggtagtgggaagacattagccttc
cttcttcctatgtaccgacatgttgtggatcagccagagcttgaaagagatgatggacca
atagctgtgattatgacaccaacaagggaacttgctcttcaaatttaccgtgaatgccga
aaattctgcaagcccctgaatctgcgtgcagtgtgtgtttatggtggcacaggcatcagt
gagcagattgcagaactgaagcgaggagcagaaatcattgtttgtaccccaggcagaatg
attgatatgttgacagctaataatggtaattttgttttagtttttcgttgcaacaagatc
tcactggatgaagctgacaggatgtttgacatgggatttgaaccccaagtgatgaggatt
atcgactgcatcaggcctgacaagcagactgttctgttttcagctacttttccacgtcag
atggaatccctagcgcgaaaaattcttgataaaccagtagagatacaagttggtggtcgc
agcattgtttgttcagatgtacagcaaaatgtggttgttattgatgaagatgataagttt
ttgaaattgcttgagttgcttggtatttatcaagagcaaggtagcattttggtatttgtt
gaaaagcaagaaaaggccgatatgttgtttaaagatttgctgcggagatcgtatccttgc
ctgtctctgcatggaggtatggatcaatttgatcgtgacagcacaatagctgacttcaag
aatggagttactaatttaatgattgccacatctgtggctgccagaggtttggatgtcaag
cagctcattctggtgatcaactatgactgtccgaatcactatgaagattatgttcacaga
tgtgggcgtactggtcgcgcggggaggaaagggacatcttttacgtttgttacttctgaa
caaggaaggcatgcaggtgatgttatcaaggcactagaatcttctgcagctgaagtgcca
gaggaattgagaaagttatggaatgactatatagaagaaaggaaagcggaaggaaaaaat
gtggtgaaaaacagtggttttacaggcaaaggatttaagttcaatgatgaagaagcagca
aaagtgaacgaagcaaaaaagctgcagaagtggaatcttggtctccaagactccgacgat
gaagctgaagccgaagagaaagctatggaagaaattaaccagcaactggatagggcgttc
gaaggcaaaccacacatcaagaaggcggtgccggttgtcagcggagaacaaataaagggg
gaccaaaaagaaaaactgaacttggccacaagtatcgcagctaaaataaaccagaagatc
atagctggcacaaacgttagtgcctcatgcgttattgcgttgacttcactcgcctggacg
gaaaccatcatgaatattacagaagtttctgaagctgctatcacagttcgtggaacgttc
tttcctccaggtaaagaaccaaaggaaggtgaacgaaaaatatatctatacatcgaaggt
ccttctgaacgctcgatccatctcgcaaaaatagaagtgaagcgagttgtcaaggaagag
atgatacgactgggttcgttccgtggaccgcaatcaagtggaagatacaaagttctctga
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