KEGG   Auricularia subglabra: AURDEDRAFT_156143
Entry
AURDEDRAFT_156143 CDS       T03129                                 
Name
(GenBank) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
adl  Auricularia subglabra
Pathway
adl03013  Nucleocytoplasmic transport
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_156143
  09122 Translation
   03013 Nucleocytoplasmic transport
    AURDEDRAFT_156143
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_156143
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_156143
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     AURDEDRAFT_156143
Spliceosome [BR:adl03041]
 Complex C
  Other components
   EJC/TREX
    AURDEDRAFT_156143
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    AURDEDRAFT_156143
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-ProteinID: EJD54363
JGI: 156143
LinkDB
AA seq 619 aa
MSLLDLNIAQIACLHELMGLYVSNLVKKPLDEAQLNAKVEAVIAVCSQTSHVHWELFLRH
EVVTVAATEGEATKRDPDAYYQALRNMLDLVLCVAEHGACEELITWTLLEDLLKLQTVDT
CWHIFLWIESRAERVTKNLIPGKNKALALLRTLNELLRRLSKAGSTSTFCGRILIFLANV
FTLGERSGVNLRGDYGPEWTPVPKPPRATPLDDLPADVRAAEERKEGMSPLFFREFWALQ
SPMARPQTFSMPETFPMFQAAVDTVLPVLAEATKRERALMGSKALNGTAAAVAAGVKRKR
EAHDTGEDGGKKKAYFFAKYLTSPELLDLEVADPQFRRQFLFQLLILLHHLSIPEPKKKE
VNGKAPGTPGTSSTTPSYLDEAGSKWRKDVGGFLYPPILWHADPLIKWKSGGCQVFDKPP
LPASFETSGRAKRRKLLEPPSPPPYSHGSAGLTEMWDRGPDDIERALEQPVSLGGLKDYA
KRIQGLNMRVEARQKMLARMPGGGPKNDTIVTNAAEERGKLSWLALRVARFEHAHLVREG
PHREQWVTVQQLAEDIGKRVGRDKATPEVGIETDSGKEKVEVKEGEGKGKGEAKEGQDTS
MEMDSPPAPAPAVSAVSAA
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtctctgctcgacctcaacatcgcgcagattgcgtgcctgcacgagctcatggggctc
tacgtctccaacctcgtcaagaagccgctcgacgaggcccagctcaacgccaaagtcgag
gcggtcatagctgtctgctcccagacctcgcatgtgcactgggaactgttcttgcgacac
gaagtcgttacagtcgcagccaccgagggcgaagcgacaaagcgcgatccagacgcgtac
taccaggcgctccggaatatgctcgaccttgtgctctgtgtcgccgaacacggcgcatgc
gaagagctgattacatggacgctgctcgaagacttgctgaaactccagaccgtcgacacc
tgctggcacatcttcctttggattgagtctcgcgcagagcgcgtcaccaagaatctcata
cccggaaagaacaaagctcttgcgctcctccgaacgctgaacgagctcttgcggcgactc
tccaaggcgggcagtacgagtaccttctgcggccgcatcctcatcttcctcgcgaacgtc
ttcacgctcggcgagcgttccggtgtcaacctgcgcggcgactacggcccagaatggacg
cccgtgcccaagccgccgcgggcgacacccttggacgacctccccgcggacgtgcgcgct
gccgaggagcgcaaagaaggcatgtctcccctgttcttccgcgaattctgggcgctccag
tcgcccatggcgcgcccgcagacgttcagcatgcccgagacattcccaatgttccaggca
gcggtcgacaccgtgcttcccgtgctcgccgaggcgacgaagcgcgagcgcgcgctcatg
ggcagcaaggcgctcaacggcaccgcggctgccgtcgccgccggcgtcaagcgcaaacgc
gaggcgcacgataccggagaggatggaggcaagaagaaggcgtacttctttgccaagtac
ttgacgagccccgagttgctggatttggaggttgcggacccccagtttcggcgacagttc
ttgttccagctgcttattctgctgcatcacctgtccatcccggagcccaagaagaaagag
gtcaatgggaaggccccgggcacccctggcacgtcttccacaaccccatcgtatctggat
gaggcaggctcgaagtggcgaaaagacgtcggtggctttctttacccgcccattctttgg
catgctgaccctctcatcaaatggaagagcggcgggtgtcaagtcttcgacaagccgcct
ttgccggcatccttcgagacttcggggcgcgcaaagcggcgcaagctgctcgaaccgccg
tcaccgccgccatacagccacggcagcgccgggctcacggagatgtgggaccgcggacct
gatgacatcgagcgcgcgctcgagcagcccgtcagccttggcggcctgaaagactacgcg
aagcgcatccagggactgaacatgcgcgtggaggcgcggcagaagatgctcgcgcgcatg
cccggcggcgggcccaagaacgacaccatcgtgaccaacgcagccgaggagcgcgggaag
ttgtcctggctcgcgctccgtgttgcgcgcttcgagcacgcgcatctcgtgcgcgaaggg
ccgcaccgagagcagtgggtcaccgtgcagcagctcgcagaggatattggtaagagggtt
ggaagggataaggcgacgcccgaggtcgggatcgaaacggactccgggaaggagaaggtc
gaggtgaaggagggggagggaaaggggaagggggaggcgaaagaaggtcaggatacgtct
atggagatggattcgccacctgcgcctgctcctgctgtgtctgctgtgtctgctgcatga

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