Auricularia subglabra: AURDEDRAFT_156143
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Entry
AURDEDRAFT_156143 CDS
T03129
Name
(GenBank) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
adl
Auricularia subglabra
Pathway
adl03013
Nucleocytoplasmic transport
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_156143
09122 Translation
03013 Nucleocytoplasmic transport
AURDEDRAFT_156143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_156143
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_156143
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AURDEDRAFT_156143
Spliceosome [BR:
adl03041
]
Complex C
Other components
EJC/TREX
AURDEDRAFT_156143
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AURDEDRAFT_156143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-ProteinID:
EJD54363
JGI:
156143
LinkDB
All DBs
AA seq
619 aa
AA seq
DB search
MSLLDLNIAQIACLHELMGLYVSNLVKKPLDEAQLNAKVEAVIAVCSQTSHVHWELFLRH
EVVTVAATEGEATKRDPDAYYQALRNMLDLVLCVAEHGACEELITWTLLEDLLKLQTVDT
CWHIFLWIESRAERVTKNLIPGKNKALALLRTLNELLRRLSKAGSTSTFCGRILIFLANV
FTLGERSGVNLRGDYGPEWTPVPKPPRATPLDDLPADVRAAEERKEGMSPLFFREFWALQ
SPMARPQTFSMPETFPMFQAAVDTVLPVLAEATKRERALMGSKALNGTAAAVAAGVKRKR
EAHDTGEDGGKKKAYFFAKYLTSPELLDLEVADPQFRRQFLFQLLILLHHLSIPEPKKKE
VNGKAPGTPGTSSTTPSYLDEAGSKWRKDVGGFLYPPILWHADPLIKWKSGGCQVFDKPP
LPASFETSGRAKRRKLLEPPSPPPYSHGSAGLTEMWDRGPDDIERALEQPVSLGGLKDYA
KRIQGLNMRVEARQKMLARMPGGGPKNDTIVTNAAEERGKLSWLALRVARFEHAHLVREG
PHREQWVTVQQLAEDIGKRVGRDKATPEVGIETDSGKEKVEVKEGEGKGKGEAKEGQDTS
MEMDSPPAPAPAVSAVSAA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctcgacctcaacatcgcgcagattgcgtgcctgcacgagctcatggggctc
tacgtctccaacctcgtcaagaagccgctcgacgaggcccagctcaacgccaaagtcgag
gcggtcatagctgtctgctcccagacctcgcatgtgcactgggaactgttcttgcgacac
gaagtcgttacagtcgcagccaccgagggcgaagcgacaaagcgcgatccagacgcgtac
taccaggcgctccggaatatgctcgaccttgtgctctgtgtcgccgaacacggcgcatgc
gaagagctgattacatggacgctgctcgaagacttgctgaaactccagaccgtcgacacc
tgctggcacatcttcctttggattgagtctcgcgcagagcgcgtcaccaagaatctcata
cccggaaagaacaaagctcttgcgctcctccgaacgctgaacgagctcttgcggcgactc
tccaaggcgggcagtacgagtaccttctgcggccgcatcctcatcttcctcgcgaacgtc
ttcacgctcggcgagcgttccggtgtcaacctgcgcggcgactacggcccagaatggacg
cccgtgcccaagccgccgcgggcgacacccttggacgacctccccgcggacgtgcgcgct
gccgaggagcgcaaagaaggcatgtctcccctgttcttccgcgaattctgggcgctccag
tcgcccatggcgcgcccgcagacgttcagcatgcccgagacattcccaatgttccaggca
gcggtcgacaccgtgcttcccgtgctcgccgaggcgacgaagcgcgagcgcgcgctcatg
ggcagcaaggcgctcaacggcaccgcggctgccgtcgccgccggcgtcaagcgcaaacgc
gaggcgcacgataccggagaggatggaggcaagaagaaggcgtacttctttgccaagtac
ttgacgagccccgagttgctggatttggaggttgcggacccccagtttcggcgacagttc
ttgttccagctgcttattctgctgcatcacctgtccatcccggagcccaagaagaaagag
gtcaatgggaaggccccgggcacccctggcacgtcttccacaaccccatcgtatctggat
gaggcaggctcgaagtggcgaaaagacgtcggtggctttctttacccgcccattctttgg
catgctgaccctctcatcaaatggaagagcggcgggtgtcaagtcttcgacaagccgcct
ttgccggcatccttcgagacttcggggcgcgcaaagcggcgcaagctgctcgaaccgccg
tcaccgccgccatacagccacggcagcgccgggctcacggagatgtgggaccgcggacct
gatgacatcgagcgcgcgctcgagcagcccgtcagccttggcggcctgaaagactacgcg
aagcgcatccagggactgaacatgcgcgtggaggcgcggcagaagatgctcgcgcgcatg
cccggcggcgggcccaagaacgacaccatcgtgaccaacgcagccgaggagcgcgggaag
ttgtcctggctcgcgctccgtgttgcgcgcttcgagcacgcgcatctcgtgcgcgaaggg
ccgcaccgagagcagtgggtcaccgtgcagcagctcgcagaggatattggtaagagggtt
ggaagggataaggcgacgcccgaggtcgggatcgaaacggactccgggaaggagaaggtc
gaggtgaaggagggggagggaaaggggaagggggaggcgaaagaaggtcaggatacgtct
atggagatggattcgccacctgcgcctgctcctgctgtgtctgctgtgtctgctgcatga
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