Auricularia subglabra: AURDEDRAFT_78395
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Entry
AURDEDRAFT_78395 CDS
T03129
Name
(GenBank) ATP-dependent DNA ligase
Organism
adl
Auricularia subglabra
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Ribosomal_S25
DUF2551
Motif
Other DBs
NCBI-ProteinID:
EJD55346
JGI:
78395
LinkDB
All DBs
AA seq
605 aa
AA seq
DB search
MSFLILVIQRSAPDDRETLLKCVYLCINRLYPDYEGKELGIGESLLIKAIASATGRTADA
IKTDMKKEGDLGLVAVNSKKNQKALKGFLKEKPLTVKSVFDTLQTIANTAGNSSQASKIG
HISKMLGMCKDLEAKYIIRSLEGKLRIGNAERSVLISLSHAVVLAEKDKALKKWSKEKTA
ARLEQASNVVKQVFSELPNYNLVIPALLEVGIDGLAERCKLTPGVPLKPMLAKPTKAIGE
VLNRFEEKRFTCEYKYDGERAQVHRVENGKMFVYSRNSEDMSKKYPELVDHFPKCFTEKT
KSFVLDAEAVAVDRTTGKLLPFQELSKRKRKDVKIEDIQVRVCLFAFDLLFLNGEPLLHK
TLEERRELLREHFTVVPGEFDFAKSSDGETTEEIQLFLEESIKDGCEGLMVKMLQSDASY
YEPSRRSVNWLKLKKDYLAGVGDSLDLVVVGAYHGAGKRTGVYGAFLLACYDPDTEEFQT
ICKIGTGFSEEALKAHHETLRELEVAVCRGDVRAGGAKPDVWLEPKVVWEVLAADLSLSP
IYTAAQGKVDQRGISLRFPRFIRVRDDKNADDATGPDQISEMYERQALAQTKSSKKGGGG
DDDFW
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccttatactcgtcatccaacggagcgcgccggacgacagagaaacgctcttg
aagtgtgtctatctctgtattaaccggctataccctgactacgaaggcaaagaactggga
atcggcgagagcctcctcatcaaggcaatcgcaagcgctacagggcgcacagcggatgcc
attaagaccgatatgaagaaggagggcgaccttggtctggtggcggtgaactccaagaag
aaccagaaggcgctgaaaggcttcctcaaggagaaaccgcttacagtgaagagtgtgttc
gatacgctccagacgatcgcgaacaccgcgggaaactcgtcgcaagcctccaagattggc
cacatctcgaagatgctgggcatgtgcaaggacctcgaggcgaagtacatcatacgcagt
ctcgagggcaagctgcgcatcgggaatgccgaacgcagcgtgctcatttcgctctcgcat
gccgtggtcctggctgagaaggacaaagccctgaagaaatggagcaaggagaagacggcg
gcgcggctggagcaggcgtcaaacgtcgtgaagcaggtctttagcgagctgccgaattac
aacctggtcatacctgcgctgctggaggtcggcattgatggtctcgccgagcgttgcaag
ctcacgcctggtgtcccgcttaaacccatgttggcgaagccgaccaaggccatcggcgag
gtgctcaaccgcttcgaagagaagcggttcacgtgcgagtacaaatacgacggcgaacgc
gcgcaggtgcacagggtcgagaacggcaaaatgttcgtctacagccgcaactcggaggat
atgtcgaagaagtatcctgagcttgtcgaccatttcccgaaatgttttacggagaaaacg
aagagcttcgtgttggatgccgaggctgtcgccgtggaccgcacgacgggcaagctgctg
ccgttccaggagctcagcaagcggaaacgtaaggacgtcaagattgaggacattcaagtc
cgcgtctgcctcttcgcgtttgaccttctcttcctcaatggcgagccgttgttgcacaag
acgttggaagagcggcgtgaattgctcagagaacacttcacagtcgtcccaggcgaattc
gatttcgccaagtcttccgacggcgagacgacggaggagatacaactcttcctggaggag
agcatcaaggacggctgcgagggcctcatggtcaagatgctgcagtccgacgcaagctac
tacgagccgagcaggcgcagtgtcaactggctcaagttgaagaaagattacctcgccggc
gtgggggactcgctcgaccttgtcgtcgtcggcgcgtaccacggcgcgggcaagcgcacg
ggcgtctacggcgccttcctgctcgcgtgctatgaccccgacacggaggagttccagaca
atatgcaaaatcggcacgggcttcagtgaggaggcgctcaaggcacaccacgagacgttg
cgcgagctcgaagttgcagtctgccggggcgatgtacgggcgggaggtgcgaagcccgac
gtatggctcgagcccaaggtcgtctgggaggttcttgctgccgatttgagcttgagtccc
atctacacggctgcacaaggaaaggttgatcagcgcggtatttcactgcgtttccctcgg
ttcattcgcgtgcgcgacgacaagaatgcggatgatgccacgggccctgaccagatctcc
gaaatgtacgagcgccaggcgcttgcgcaaaccaagtccagcaagaaaggcggaggcggc
gacgacgacttctggtga
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