Tsuneonella dongtanensis: A6F68_00172
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Entry
A6F68_00172 CDS
T04466
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ado
Tsuneonella dongtanensis
Pathway
ado03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ado00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6F68_00172 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ado03021
]
A6F68_00172 (rpoB)
03400 DNA repair and recombination proteins [BR:
ado03400
]
A6F68_00172 (rpoB)
Enzymes [BR:
ado01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6F68_00172 (rpoB)
Transcription machinery [BR:
ado03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6F68_00172 (rpoB)
DNA repair and recombination proteins [BR:
ado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6F68_00172 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ANY18707
UniProt:
A0A1B2A963
LinkDB
All DBs
Position
complement(196982..201163)
Genome browser
AA seq
1393 aa
AA seq
DB search
MATKAKAPAPTRGKQTGTAKKRIRRIFGDIHEVVQMPNLIEVQRESYEQFLRSDKSTGYV
SGLEKTLRSVFPIRDFAGTAELDFVHYELEDPKYDTTECRQRGITYAAPMKVTLRLIVFE
VDTETETRSVLDIKEQDVYMGDMPLMTENGTFIINGTERVIVSQMHRSPGVLFDHDRGKT
HSSGKLLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGLSAEDILHHF
YDTISWERAKDGWKVPFSAEAWRGQKPAFALVDAKTGEEVFPAGQKISPRAANKAAKDGL
EALLIPTEEIFGRFAANDLIDEKTGRIWIEAGDEVGPDNLEALDKAGVDRLELLDIDDVN
TGPWIRNTLKVDKAENREEGLEAIYKVMRPGEPPTKETAEALFEGLFFDSERYDLSAVGR
VKLNMRLGLDAEDTVTTLRKEDILAVVKELVGLKDGKGEVDDIDNLGNRRVRSVGELLEN
QYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLS
EVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFARVN
KYGFIETPYRLVKDGKVSGEVVYLSAMEEQKHAVAQASAETNEDGSFVEDLISARQAGEF
VMLPKDQITLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGT
GMEETVARDSGAAITAGRGGVVDQVDATRIVIRAVGDVEPGQSGVDIYRLQKFERSNQST
CINQRPLVKVGDVVEQGDIIADGPSTEFGELALGRNSLVAFMPWNGYNYEDSILISERIV
KDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVHPGDIL
VGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGIEVDD
RTRAIQNQEIEQLRKDSQDERAILNRATYNRLKDMLVGQVASAAPKGIKKGEAITDELLE
GVEKFEWFKFAVADDGRQAQIEAIKAQYDEAVKGIDEKFEDRKEKLERGDELAPGVLKMV
KVFVAVKRKLQPGDKMAGRHGNKGVISRILPAEDMPFLEDGTPVDIVLNPLGVPSRMNVG
QIFETHLGMAARGLGQQITAALEEWREANPDPQAAKAPTAVVEKLKEVYGEQYHGDIDSR
SAEDIVEMAGTLKNGVPFGTPVFDGAREADVSAMLEKANLPTSGQVVLYDGRTGEAFDRK
VTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAA
YTLQEMLTVKSDDVVGRQKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELSSLGE
DDDDADGLAIAAE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaggcgaaggccccggctcctacccgcggcaagcagaccggcaccgcgaag
aagcgcatccgccgcatcttcggcgacatccacgaagttgtgcagatgccgaacctcatc
gaggtccagcgcgagagctatgagcagttcctgcgctcggacaagagcaccggttatgtg
tcgggcctcgagaagaccctgcgcagcgtgttcccgatccgcgacttcgccggcaccgcc
gagctcgacttcgtccactacgagctggaagatccgaagtacgacaccaccgagtgccgc
cagcggggcatcacctatgccgcgccgatgaaggtcaccctgcgcctgatcgtgttcgag
gtggataccgagaccgagacccgcagcgtcctcgatatcaaggagcaggacgtctacatg
ggcgacatgccgctcatgaccgagaacggcaccttcatcatcaacggcaccgagcgcgtg
atcgtttcgcagatgcaccgttcgccgggtgtgctgttcgaccacgatcgcggcaagacg
cattcctcgggcaagctgctgttcgccgcgcgcgtcatcccgtaccgcggatcttggctc
gacttcgagttcgacgccaaggacatcgtgaatgtccgtatcgaccgcaagcgcaagctg
ccggtcacggcgctgctctacgccctcggcctgtccgccgaggacatcctgcatcacttc
tacgacaccatttcgtgggagcgcgcgaaggacggctggaaggtcccctttagcgccgaa
gcgtggcgcggccagaagcctgcgttcgcgctggtcgatgccaagaccggcgaggaagta
ttcccggccggccagaagatcagcccgcgtgccgcgaacaaggccgcgaaggacgggctc
gaggcgttgctgatcccgaccgaggaaatcttcggccgcttcgccgccaacgacctgatc
gacgagaagaccggccgcatctggatcgaggctggtgacgaagtcggccctgacaacctc
gaggcgctcgacaaggcgggcgtcgaccggctcgagctgctcgacatcgacgacgtcaac
acgggcccgtggatccgcaacaccctgaaggtcgacaaggccgagaaccgcgaggaaggc
ctcgaggcgatttacaaggtcatgcgtccgggtgagccgccgaccaaggaaaccgccgag
gccctgttcgaaggcctgttcttcgacagcgagcgttatgacctgtcggcggtcggccgc
gtgaagctcaacatgcgcctcggcttagacgccgaggacacggtgaccacgctgcgcaag
gaagacatcctcgccgtggtcaaggaactggtcggcctgaaggacggcaagggcgaagtc
gacgacatcgacaacctcggcaaccgccgcgtgcgttcggtcggcgagctgctcgagaac
cagtaccgcgtcggcctgctgcgcatggaacgcgcagtgaaggagcgcatgagctcggtc
gacgtgtcgacggtgatgccgaacgacctcatcaacgcgaagcccgccgtggccgcggtg
cgcgagttcttcggctccagccagctgtcgcagttcatggaccagaccaacccgctctcc
gaagtgacgcacaagcgccgcgtctcggcgctcgggccgggcggtctcacccgcgagcgt
gccgggttcgaggtgcgcgacgtgcacccgacgcactacggccgcatctgcccgatcgag
actccggaaggcccgaacatcggccttatcaactcgctctcgaccttcgcacgcgtcaac
aagtatggcttcatcgagacgccctaccgcctcgtgaaggacggcaaggtgtcgggcgag
gtcgtctacctctcggcgatggaagagcagaagcacgccgtcgcgcaggcttcggcggag
accaacgaggatggttcgttcgtcgaggacctgatctcggcgcgccaggccggcgagttc
gtgatgctgcccaaggaccagatcacgctgatggacgtctcgcccaagcagctcgtctcg
gtcgccgcctcgctgatcccgttcctcgagaacgatgacgcgaaccgcgcactgatgggc
tcgaacatgcagcgccaagcggtgccgctggtccgtgccgaggcgccgttcgtgggcacc
ggcatggaggagacagtggcgcgcgattcgggcgcggccatcaccgccggccgcggcggc
gtggtcgaccaggtggacgcgacccgcatcgtcatccgcgcggtgggcgacgtcgagccc
ggccagtcgggcgtcgacatctatcgcctgcagaagttcgaacgctcgaaccagtcgacc
tgcatcaaccagcgtccgctggtgaaggtcggcgacgtcgtcgaacagggcgacatcatc
gccgacggtccctcgaccgagttcggcgagcttgcgctcggccgcaacagcctcgtcgcg
ttcatgccgtggaacggctacaactacgaggactcgattctgatctccgaacgcatcgtg
aaggacgacgtgttcacctcgatccacatcgaggaattcgaggtcatggcccgcgacacc
aagctagggcccgaggacatcacccgcgacatcccgaacgtcggcgaggaagccctgcgc
aacctcgacgaggcgggcatcgtctacatcggcgccgaagtgcacccgggcgatatcctg
gtcggcaagatcacgccgaagggcgaaagcccgatgacgccggaggaaaagctcctccgc
gcgatcttcggcgagaaggcgagcgacgtgcgcgacacttcgctccgcctgcccccgggc
gttgccggtacgatcgtcgacgtgcgcgttttcaaccgccacggcatcgaggtcgacgac
cgtacccgcgcgatccagaaccaggagatcgaacagctccgcaaggatagccaggacgag
cgggcgatcctcaaccgcgcgacctacaaccgcctgaaggacatgctcgtcggccaggtt
gcctcggccgcgcccaagggcatcaagaagggcgaagcgatcaccgacgaactgctcgaa
ggcgtcgagaagttcgagtggttcaagttcgcggtcgccgacgacggtcgccaggcgcag
atcgaggcgatcaaggcgcagtacgacgaagcggtgaagggcatcgacgagaagttcgag
gaccgtaaggagaagctcgagcgcggcgacgaactggccccgggcgtgctgaagatggtc
aaggtcttcgtcgcggtgaagcgcaagctgcagccgggcgacaagatggccggccgtcac
ggcaacaagggcgtcatcagccgcatcctgccggccgaggacatgccgttcctcgaggac
gggaccccggtcgacatcgtcctgaacccgctcggcgtgccttcgcgcatgaacgtcggt
cagatcttcgaaacccacctcggcatggccgcgcgcgggcttggtcagcagatcaccgct
gcgctcgaagagtggcgcgaggccaatcctgatccgcaggcggccaaggcgccgaccgcg
gtcgtcgagaagctgaaggaagtctatggcgagcagtaccatggtgacatcgacagccgt
tcggccgaggacatcgtggagatggcggggacgctgaagaacggcgtgccgttcggtacc
ccggtcttcgacggtgcgcgcgaggcggacgtttcggcgatgctcgagaaggcgaacctg
ccgacttcgggccaggtcgtgctctacgacggccgcaccggcgaggcgttcgaccgcaag
gtgaccgtgggctacatctacatgctgaagctccaccacctcgtcgacgacaagatccac
gcgcgttcgatcgggccgtacagcctcgtcacccagcagccgctgggcggcaaggcgcag
ttcggcggccagcgcttcggcgaaatggaggtctgggcgctccaagcctacggcgccgcc
tacacgctgcaggaaatgctcaccgtgaagtcggacgacgtggtcggccggcagaaggtc
tacgaagcgatcgtcaagggtgacgacaccttcgaggccggcatcccggagagcttcaac
gtgctcgtgaaggaaatgcgcagcctcggcctcaacgtcgaactctcctcgctcggcgag
gatgacgacgacgccgacggcttggccatcgcggcagagtaa
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integrated database retrieval system
