Apis dorsata (giant honeybee): 102680423 Help Entry 102680423         CDS       T09121                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism adr  Apis dorsata (giant honeybee) Pathway adr03018   RNA degradation Brite KEGG Orthology (KO) [BR:adr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     102680423  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:adr03019]     102680423 Enzymes [BR:adr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      102680423 Messenger RNA biogenesis [BR:adr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      102680423   mRNA degradation factors    3'-5' decay     Ski complex      102680423 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Helicase_C MTR4_beta-barrel ResIII ATPase_2 DUF3067 Motif Other DBs NCBI-GeneID:  102680423 NCBI-ProteinID:  XP_006611384 EnsemblRapid:  LOC102680423 LinkDB All DBs Position Unknown AA seq 1225 aa AA seqDB search MDVKNDTNKQMLEFELPPIWPDIRTELREYIECLDNLPIYHLDNAQCYWPRKPDILSLLN CDIAPLGTTLKFNRDPVTGKLGEMHEVPLKSAGETARNSMSMTRAPGPPSDIIRGNTSNI PFWPGGFDEPEMIVDSLIEEIDFENNLRTLAKGFSAGIEFKSDNYTPKEKTIQEQESLES ERNEIESTADKINLMAIVEEEQNELDFWKLETKKVKEETKTKTSDISESAFDEITSLLEE TNIPILNISEKRVETITEWAEQLDVSVPLTDFEKRIPELAMSFPYELDIFQKQAILKLEE GCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSPIKALSNQKYRELKRKFESVGLLT GDLQINPNASCLIITTEILQSMLYCASEVLRDLEFVIFDEVHYINNDERGHVWEESVILL PQTVTIVMLSATVPNPLVFADWVGRTKKKKTYVISTLKRPVPLQHYLYTGTDGKTKDDKF LVLGESGQFLLDGWYKATNSKNSKNQVNKNIKDVKKISMHQQMTPKQEQVLWSAFISHLK TQNMLPVVVFMLSRKRCDMSAVLLRNVDLTTETEKHTIRAFFQNNIRHLKGTDRQLPQVL MMQELLESGIGIHHSGILPILKEIVEMLFQTGVVKLLFATETFAMGVNMPARTVVFDSIK KYDGNNFRILYPSEYVQMAGRAGRRGHDTTGMVIVMCRTSVPHFNELKNMMCGQAQNLES KFKVTYSMVLNLRRLNESVTVEAMMRRSFKESPVVINQNNYKMQLQEVENELSKLPPLTD LQKKLSDFYRVAVDYLEYLKYLKPYFYETQKKAVKSLTPGRILLISYESHYNKLALLLGT VQNKGNRQYRVLVLKNSDISKSIKEIEEKNQKINKSDKWYDIVALTKKEIFIPVGIPSDE VLTIDAWNILEITNCQIKIDYNLVLANWEKRQIPRFKNEEPSQTYKTAMQELMTLSLNAS HNSSILKPYLEMKMNYDVDRKLQHLFDLKKAVYDMKCREILNFEEQFEIVYERSELESKK NKLQLKLSDEGLSLYPEYTNAVALLKDLGYIDNDERVALKGRVALQMGNNELLITELILK NVLTVLQPAEIAALLSALIFQQRTDIEPNLTPELKRSCEEIKEIHAELEALEQHYQLVTL QPLNFGLVEVVYDWAQAKSFAEIMEKTDVQEGIIVRCIQQLSETLRDVKNAATTIGDPVL KEKMEEASTVIKRDIVFAASLYTQN NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggatgtaaagaacgatacaaataaacaaatgttagaatttgaattgccacctatttgg cccgatattagaactgaattaagggaatatatagaatgtttggataatcttccaatatat catttggataatgcacaatgttattggccaagaaaacctgatattctttctcttttgaat tgtgatatagcaccacttggtaccacattaaaatttaatagagatcctgttactggcaaa cttggagaaatgcatgaggtacctttgaaatcagcaggtgaaactgctagaaattctatg tctatgacacgtgcaccaggtccaccttctgatattattagaggaaatactagtaatatt ccattttggccgggtggttttgatgaacctgagatgatagtggactcattaatagaggaa attgattttgaaaataatttaagaacattagcaaaaggatttagtgcgggtatagaattt aaaagtgataattatactccaaaagaaaaaacaatacaggaacaagaatcattggaatca gaaagaaatgaaattgaaagtacagcagacaagatcaatttaatggctattgtagaagaa gaacaaaatgaacttgatttttggaaattagaaacaaaaaaagtaaaggaagaaacaaaa accaaaacttcagatatttcagaatcagcatttgatgaaattacttcattattagaagaa acaaatatacctattttaaatatttcggaaaaacgtgtggaaactataacagaatgggca gaacaattagatgtatctgttccacttactgattttgaaaaacgaattcctgaattagca atgagttttccatatgaattagatattttccaaaaacaagctattcttaaattagaagaa ggttgtaatgtgtttgttgctgcacatacatctgctggaaaaacaactgtagcagagtat gctatagcattaagtcaaaaacatatgacaaaagtcatttacacgtctcctataaaagca ctttcaaatcaaaaatatcgcgaacttaaaagaaaattcgaaagcgtaggattattaaca ggagatttacaaattaatccaaatgcatcatgtcttatcataaccacggaaattttacaa tctatgttatattgcgcatccgaagttttaagggatttagaatttgttatatttgacgaa gtgcattacattaataatgatgaacgtggtcatgtttgggaagaaagtgtgatacttcta ccacaaacagttactatagtaatgttgtctgcaactgtgccaaatcctctagtatttgct gattgggttggtcgtacaaaaaaaaaaaagacatatgtaataagcactctaaaacgacct gtaccccttcaacattatttatatactggaactgatggtaaaactaaagatgataaattt ttagtattgggtgaaagtggtcaatttttattagatggatggtataaagcaacaaattct aaaaattcgaaaaatcaagtaaataaaaatattaaagatgttaaaaagatatctatgcat caacaaatgactccgaaacaagaacaagtattatggagtgctttcataagtcatttaaaa acacaaaacatgttgcctgtcgttgtttttatgttatcacgaaaacgatgcgacatgagt gctgtattattaagaaatgttgatctcacaactgaaactgaaaaacacactattcgagct ttttttcaaaataatattcggcatttaaaaggtactgatagacaattaccacaagtgctt atgatgcaagaattattagaaagtggaattggtatccatcatagtggtatattacctatt ttaaaagaaatagtggaaatgcttttccaaactggagttgtaaaattattgtttgcaaca gaaacatttgcaatgggtgttaatatgccagcgcgtactgtagttttcgattctataaaa aaatatgacggtaataatttccgaatactttatccttctgaatatgtacaaatggctggt cgagctggtcgtagaggtcatgatacaactgggatggttatagttatgtgtcgaacatct gtgccacattttaatgaattaaaaaatatgatgtgtggacaagctcaaaatttagaatcg aaatttaaagtaacatattctatggtattaaatctaagaaggctaaatgaatcggtgaca gtcgaagcaatgatgcgaagatcttttaaagaatcaccagtagttataaatcaaaataat tataaaatgcaattacaagaagtggaaaatgaattatcaaaattgccacctctaaccgat ttacaaaagaaactttccgatttttatcgagtagctgttgattatttagagtatcttaag tatttgaaaccttatttttacgagacacaaaaaaaagcagtaaaaagtttaacacccgga agaatattgcttatatcatatgaaagtcattataataaattagctttattattaggcacg gttcaaaataaaggtaatagacaatacagagtattagttcttaaaaattctgatatatca aagtctatcaaagaaatagaagaaaaaaatcagaaaattaataaatccgataaatggtac gatattgttgctttaacaaaaaaagaaatatttataccagttggaattccatcagatgaa gtattgactatagatgcatggaatatattagaaataacaaattgtcaaattaaaatagat tataatttggttttggcaaattgggaaaaaagacaaatacctagatttaaaaatgaagaa cctagtcaaacttataaaacagcaatgcaagaattaatgactctatctcttaatgcttct cataattcttctatattaaaaccatatctggagatgaaaatgaattatgatgttgatagg aaattacaacatttattcgatttaaaaaaagctgtatatgatatgaaatgtagagaaata ttgaattttgaagaacaatttgaaattgtatatgaacgaagtgaattggaaagcaaaaaa aataaattacaattaaaacttagtgatgaaggattaagtttgtatcctgaatatacaaat gctgttgcacttcttaaagatttaggatatatagataatgatgaaagagttgcattgaaa ggtcgagtagctttacaaatgggaaataacgaattattaattacagagctcattcttaaa aatgtattaactgtacttcaaccagctgaaatagcagcattgttatctgctttaatattt caacaacgaactgatattgaaccaaatttaacaccagaattaaagaggagttgtgaagaa ataaaagaaatacatgctgaattagaagctttagaacaacattatcaattagtaacatta caaccactaaactttggtttagtagaggtagtttatgattgggcacaagcgaaatcattt gccgaaattatggaaaaaacggatgtacaagaaggaatcatagtacgatgtattcaacaa ttaagtgaaacgttacgagatgtaaaaaatgcagctactactataggtgatcctgtttta aaggaaaaaatggaagaagcttctactgttattaaaagagatattgtttttgctgcatcc ttgtatactcaaaattaa

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