Arachis duranensis: 107464221
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Entry
107464221 CDS
T04300
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107464221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107464221
03019 Messenger RNA biogenesis [BR:
adu03019
]
107464221
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107464221
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107464221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Ribonuc_2-5A
VHS
Motif
Other DBs
NCBI-GeneID:
107464221
NCBI-ProteinID:
XP_015938639
UniProt:
A0A6P4C4A3
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All DBs
Position
9:complement(3924004..3926573)
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AA seq
322 aa
AA seq
DB search
MYSENLMVSAENPRPFAFQQHLSSSSSTTTSANAKPMSNEIAQMPPPSTLGCRFEAMLKL
RDDELRATAGHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAI
CARILKVPAEQKLPSLYLLDSIVKNFGQEYVTYFALRLPEVFCEAYRQVQPHLHPAMRHL
FGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLE
RSTVDSTSGKEWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFM
TQVLGFGLLVVVVFVGMVLLKS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaaaatctgatggtgtccgctgaaaaccctagacccttcgcgtttcagcaa
catctgtcttcttcttcgtctactactacttcggccaacgcgaaacccatgagcaatgag
atcgcacagatgcctcccccttccactctcggttgcaggttcgaggctatgctcaagctg
cgcgacgacgagctcagggccactgccggtcacgtgccccctccgtctacggaagaaatc
gttcagctgtacgagatgctgctgtcggagctcacgtccaatcagaagctcattatcaac
gatctcaccttcatcgctgtgcaccagagggagcatgccaggggcatcgccgacgctatc
tgcgctcggattctcaaggtgcctgcagagcaaaagcttccttcactctatctcttggac
agtatagtgaagaactttggacaggaatatgttacatactttgcattacgcctgcccgaa
gttttctgtgaggcatacaggcaggttcagcctcatttgcaccctgctatgcgccatctc
tttggcacctggtcagaagtctttccaccgtctgccctacgcaagattgaagctgagttg
caactttctcaagtagttaataatagtcaatcgtccaacatgaatcccctcagagcatct
gaatctcctagtccaagtcatggcatacatgtaaatccaaagtacctgcagcagttggag
cgctctactgtagatagtacaagtgggaaagaatggtgtggcttattcgtcggggatgat
tgtgtgcaagaggagctgcttgaaaaagctgttccaggagatgatgatggtgaaaggaaa
atgaactttgcatggcgggtggacaagatggaagcagacattagaaatctgaaattcatg
actcaagttcttgggtttgggttgttggtagttgtagtttttgtaggaatggtgctctta
aagagttga
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integrated database retrieval system
