Arachis duranensis: 107466657
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Entry
107466657 CDS
T04300
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
adu
Arachis duranensis
Pathway
adu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107466657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107466657
03019 Messenger RNA biogenesis [BR:
adu03019
]
107466657
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107466657
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107466657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Motif
Other DBs
NCBI-GeneID:
107466657
NCBI-ProteinID:
XP_015941146
UniProt:
A0A6P4BPR1
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Position
9:complement(105674102..105676795)
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AA seq
470 aa
AA seq
DB search
MANGISHQPSPSMLVDQFNALLPRRQSYLKAFSTEEIVRTYGLLLSLLSELTSNVNPIIT
DLTIIAGQQRKHAKGIADAICNRILEVPADKKLPSLYLLDSIVKNFGQEYVKYFSLRLPQ
VYCEAYRQVQPNLHSVLQRLIGTWSKIFPPSVLSNIEAQLQSLPAINNQQPFANHFGEYD
FHGPILGAHVIKPQSLQQMEHYSSIMDIVGGDRLDSTGTVGNTREGGLNEWQQKRFSSDG
WNIFQTSKTYNLNDEQRRQSPRALIEAYGCDKGREIPSTKLLFVEQQPGRNGLGSKFPLA
SWQHTEEEEFDWKDMNPGLVDCSRNSSSMQSSVRFSRKRKLSNDLSNSSHYPFNMGAASP
AFNAHATRPSGLNPAFPLQKRPRSLLEPININNNTNVGHGPNRTLFIHDQLPNQPGPISS
NLQNHGQAPQLQFLPPQVPSSTQISHGSSLHLHGGTLPLYVQASQLLHHK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggtatctcgcaccagccttctccttccatgctcgtggaccagtttaacgcc
ttacttccacggcgccaaagctacctcaaggctttctctaccgaagaaattgttcggacg
tatgggctattgttgtcattgttgtcagaactcacctccaatgtgaatcccatcattacc
gatctcactatcattgctggccagcagaggaaacacgccaagggcatcgccgatgccatt
tgcaaccggattcttgaggtgcctgctgataaaaaacttccttctctctatcttctggac
agcattgtgaagaattttggccaggaatatgttaaatacttctctttacgtctacctcaa
gtttactgtgaggcatacagacaggtccagcctaatctacattctgttctgcaacgtctc
attggtacctggtcaaagatctttcctccctctgtcctaagtaatattgaagctcaattg
caatctttaccagcaattaataatcaacaaccctttgctaatcactttggggaatatgat
tttcatggaccgattcttggagcacatgttattaaaccacaatccttgcagcagatggaa
cactatagttcaattatggatattgttggtggtgatcggttggactcaacgggaactgta
ggtaatacaagagaaggagggttgaatgaatggcagcaaaagagattttctagtgatggt
tggaacatattccaaacttccaagacttataatctcaatgatgaacaacgacgtcaaagt
ccaagagctcttattgaggcatatggttgtgacaaaggccgtgaaattcctagtactaag
cttttgtttgtggagcagcagcctggcagaaatggtttagggagcaagtttccattggca
tcatggcagcacactgaagaagaggagtttgattggaaagatatgaatccaggattagta
gactgtagtagaaacagcagttctatgcaatcaagtgttagattctccaggaaaaggaag
ttatctaatgatctatctaattcttcacattacccgttcaatatgggggctgcttcccct
gctttcaatgctcatgctactcgtccttccggcttgaatccagcatttccattgcaaaaa
cgtcctaggagtctgcttgaaccaataaacattaataataacaccaatgtgggtcatggt
ccaaatagaactctgtttatacatgaccagttgcctaatcaacctggaccaatttcctct
aacctgcaaaatcatggacaagcacctcaactacagtttcttccacctcaagttccatct
tcaacacaaattagtcatgggagctctttgcatttacatgggggaaccttgccactttac
gtccaagcctcccaactgctccatcacaaatga
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