Arachis duranensis: 107482109
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Entry
107482109 CDS
T04300
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
adu
Arachis duranensis
Pathway
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107482109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adu03041
]
107482109
Enzymes [BR:
adu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107482109
Spliceosome [BR:
adu03041
]
Complex C
Other components
Step II factors
107482109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
Helicase_RecD
ABC_tran
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_30
ATPase_2
SRP54
FtsK_SpoIIIE
nSTAND1
AAA_29
Flavi_DEAD
T2SSE
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
107482109
NCBI-ProteinID:
XP_015957988
UniProt:
A0A6P4CX70
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All DBs
Position
3:complement(133331547..133342323)
Genome browser
AA seq
695 aa
AA seq
DB search
MATLPIVQYEEKIIETVERNPVVVVIGETGSGKSTQLSQMLYRRGYADSARIAITQPRRV
AAVTVARRVAQELGVQLGEEVGYAIRFEDRTSHRTRIKYLTDGVLLRESLVNPELNEYSV
IILDEAHERSLNTDILMGLMKRLAKIRTSNLKVLITSATLDGDKVSNFFRDCPVLTIPGK
LYPVEILYSKERPSSYLESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKVRSL
EEGSCMDAIILPLHGSLPPELQVRVFSPPPPSCRRIIVATNIAETSLTVDGVVYVIDSGY
VKQRQYNPSTGMYSLDIVQISKVQANQRAGRAGRTRPGKCYRLYPSQVYNDEFLDVTVPE
IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIG
QKMAELPLEPSLSRTLMEANDYGCIPEALTVAAMLSAETTLLPGRSKTEKKRKHPEPNLP
DGFGLGDHIQLLQIFECWDQTDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPL
DRRRGESRQDYRNLRKALCVGYANQLAERKMHHNGYRTLGFQGQVVQVHPSSVLKADDLG
KFPDYVVYHELIATPRPYMRNVCSVEMRWVVPVINKLKTLDVYKLSGGTGPVEEENERNV
PDLPKKNVEVTAGVDDSESRIQAARERFLARKGKK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacttccaatagtgcaatatgaagaaaagatcattgaaactgttgagcgcaat
cccgtcgttgttgtcatcggagaaaccggttccggaaagagcacccagctctctcagatg
ctctaccgccgcggctacgccgattccgccagaatcgccatcactcagccccgccgtgtc
gctgcggtcaccgtcgcaaggcgcgttgcgcaggagcttggcgttcagcttggagaggaa
gttggatatgccattcgattcgaggatagaacttcacaccgcacgcgcataaaatatctt
accgacggggttctgctccgcgagagtctggtgaatcctgagctgaatgagtattctgtc
atcatattggacgaagctcatgaacggagcttgaacacggatatattgatggggctgatg
aaacgcttggctaaaattcgtacttccaatctcaaagtcttgatcacatcggccactctt
gatggtgataaagtttcaaatttctttagggactgtcctgtgttgaccatcccaggaaaa
ctgtacccggttgagatactttatagcaaggagcgtccgtcaagctatcttgagtcttct
ctgaaaacggctattgatatacatgttcgtgaaccggaaggggatgtcttgatattcatg
actggacaggatgatatagagaaattggtatctaagttagaagataaagttcggtctttg
gaggaaggttcttgcatggatgctataatcctccccctacatggttccttgccacctgaa
ttgcaggtgcgtgtatttagtcccccacctccaagctgtaggcgaattattgttgcaaca
aacattgctgaaacttctttgactgttgacggtgttgtgtatgttattgactctgggtat
gtaaagcaaaggcagtataatccatctaccggcatgtattctcttgatattgttcaaatt
agcaaagtgcaagcaaatcagcgtgcaggccgagcaggacgaacccgtcctggaaaatgc
taccgtctgtatccttcccaagtttacaatgatgagttcttggatgttactgttcccgaa
atacagagatcttctcttgctggtagtgttctttacttgaagtcattggaccttccagat
attgacatcctgaaatttgattttcttgatcctccttcatctgagtccttacaagatgcc
ttgaagcaattatatctgattgatgctattgatgaaaatggtgcaattacaagtattgga
cagaaaatggctgagcttccattagaaccttccttatcacgaaccttgatggaggcaaat
gattatggttgcatacctgaggctttgactgttgctgccatgttatcagctgaaactaca
ttgctaccagggcggagcaaaactgagaaaaagaggaaacacccagagcccaaccttcct
gatggctttggcttgggtgatcacatacaattgctgcagatatttgagtgctgggatcaa
actgattatgacattggttggtgcaaagacaatggcttacaggtgcgagggatgctgttt
gttagagatgtccgtaagcagttatctcagataatgcagaaaatagcaaaaggaccactc
gataggagaaggggagagtctcgacaggattatcgaaatttgaggaaggctctatgtgtg
ggatatgcaaatcagctggctgaaaggaaaatgcatcacaatggttatcgaactttgggt
tttcaaggccaagtagtccaggtacatccatcgtctgttctgaaagctgatgatctgggg
aagtttccagactatgttgtgtaccatgagctaattgcaactccacgtccatacatgaga
aatgtatgttctgttgagatgagatgggttgtacctgttattaacaagcttaagacactt
gacgtatacaaactaagtggtggaactggtcctgttgaggaggagaacgagagaaatgta
ccagatttgccgaaaaaaaatgttgaagttactgctggtgttgatgacagtgaaagtaga
atccaagcggctagagaacgatttcttgctcgtaaaggcaagaaatga
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