Arachis duranensis: 107483951
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Entry
107483951 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
adu
Arachis duranensis
Pathway
adu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107483951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adu03400
]
107483951
Enzymes [BR:
adu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107483951
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107483951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
T_Ag_DNA_bind
Motif
Other DBs
NCBI-GeneID:
107483951
NCBI-ProteinID:
XP_052116252
UniProt:
A0A9C6WHV1
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All DBs
Position
4:29858188..29872148
Genome browser
AA seq
1178 aa
AA seq
DB search
MATEQTKFSVMCSLFNWTQRAKSPAKKRAKFRKFLDSFCADRNFFPAIRLVLPNLDRERG
SYGLKESVLAISLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVATEVLQRRQGT
ASGGLTIKEVNDLLDQLAASENRAEKTQVLSTFIQKTNAQEMKWIIMIVLKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAW
KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYAHAMSEIIQQNILVDRCIL
DGEMLVWDSSLNRFAEFGSNQEIAKAARDGLDSDRQRIYIXNALTSDWLDVAFDILYFGD
TSVIHQTLKERHEILRKVVRPLKGRLEILVPNGGLNSHCSSGEPCWSFIAHNVDEVEKFF
KETIENRDEGIVIKDLGSKWEPSDRSGKWLKLKPEYIQAGTDLDVLIIGGYYGSGRRGGE
VAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELDALVTKLKPYFRKYEYPKKRPPSF
YQVTNHSKERPDVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWYE
CLDVQSFIELVQSSNGTTQRDTETKQGGKSNRIRSSIRGEKKNMSIVPSHLTQTDVSSIK
GDSRIFSNMMFYFVNVPPSHSLESLHKMIAENGGVFSMNLNNSVTHRVAAESKGFKFEAA
KRHGDIIHYSWILDCCSQKKLVPLQPKYFLFLSEVTRKKLQEEIDEFSDSYYMYIDLGEF
KQLLNTINRSEDISTIDHYSKKYCPKDEWSVFIGCSIYFHTAIPSVKGDWKVLLQLALRR
FKVEVLMGGGRVTDKLTCATHLVVLSVPGYDAEFDEIQRCFTSVDRRFLQSKRLHIIKSH
WFEDCLDNNKRLPEESYSLRPSAIEESTSENGENDILEAHFGGDNVQDQNVPSEKENRQR
SAKAAHEHSLATVSHENVGPRKRGRPAGRGVKNVKMAGNKAQRARPRTVRKRAKISEYES
DKSDSHDNEPEEQEDDTGEASFDIYNRHLEPQEVEQQANVQVAETEESSEPNRAVHDLRN
SSESERMYVPEIKMADRTNDQNSELAKEIENRADPMLFDKIPSLATAKKVEDTKHCDLKE
ERPAAAAESSSTNTAEPTITKKKKVSYKDVANDLLKDW
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagcaaaccaagttcagcgttatgtgcagcctcttcaactggacgcagcgt
gccaagtcgccggccaagaagcgcgcaaagttccgcaagttcctcgactcattctgcgcc
gaccgcaacttcttccctgccattcgccttgtcctcccaaacctcgaccgcgagcgcggc
tcctacggcctcaaggagtcagtcctcgccatttccctcatcgacgccctcggcatgtct
cgcgactccgaagacgcccttcgcctcattaattggcgcaagggcggcgccaagaccggc
gccaatgccggcaatttcgccctcgtcgccaccgaggtactgcagcgcaggcaaggtact
gcttcgggtggattgacgataaaggaggtaaatgacttgcttgatcagttggctgctagt
gaaaacagggccgagaagactcaggttctttctacctttatccaaaagacaaatgcacag
gaaatgaagtggattatcatgatagtcctcaaagatctgaagctaggaattagtgaaaaa
agcatttttcatgaattccatcctgatgctgaagacttatttaatgttacatgtgactta
aaattagtgtgtgaaaaactaagggatcggaatcagcgtcataagcgacaggatattgaa
gttggaaaagctgtgcgtcctcagctagctaagagagttgctaatgcagctgaagcatgg
aagaagcttcatgggaaggaagtggttgtcgagtgcaaatttgatggtgaccgcattcaa
attcacaaaaatggaacagagatacatttcttctcgaggaacttccttgatcattcagaa
tatgcacatgcaatgtcagaaatcatacagcaaaacattttggtagataggtgcatactt
gatggtgaaatgttggtttgggacagttccttgaatcgttttgctgagtttggctcaaat
caggaaatagccaaggcagcaagggatggacttgacagtgacagacagagaatttatatc
taaaatgccttgacttcagattggctagatgttgcatttgatatcctttattttggagat
actagtgtaattcaccaaactttgaaggaacgacatgagattctccgtaaagttgtgagg
ccattgaaggggcgccttgaaattttagtacctaatggtggtcttaatagtcattgctct
tctggtgaaccatgttggtcattcattgctcataatgtggacgaagttgagaaatttttc
aaagaaactatagagaacagagatgagggaatagttatcaaagacctcggttctaaatgg
gagcctagtgatcgaagtggaaagtggctaaaattgaagcctgagtacattcaagctggc
actgatctggatgtgcttatcataggaggttattatggctctggacgacgtggaggggag
gttgctcagttcttggtgggccttgctgagcgtccatccccaaatacacatcccaagcgg
tttatctccttctgtagagttggtactgggctttctgatgatgagcttgatgcgttagta
acaaaactcaaaccttacttccgaaagtatgaatatccgaagaagaggccgccaagtttc
tatcaagtaactaatcattcaaaagaaaggcctgatgtgtgggttgatagccctgaaaaa
tcgattattctgtccataaccagtgatatccgaactatagaatctgaggtatttgctgca
ccgtacagcctgaggtttcctcggattgacagggtgagatatgacaaagcttggtacgaa
tgccttgatgtgcaatcattcatagaactagtacagtccagcaatggaactactcagagg
gatacagaaaccaagcagggtggcaaatcaaatcgtataaggtcctccataaggggagaa
aagaaaaacatgtccattgttccttctcatttaactcagactgatgtttccagtatcaag
ggagactctcgtatattttcaaatatgatgttttacttcgttaatgtgcctccatctcat
tctcttgagagcttgcacaaaatgattgcagagaatgggggagttttctcaatgaacttg
aataactctgtcactcatcgtgtggcggcagagagcaaggggtttaaatttgaagctgca
aaacgtcatggtgatatcattcactacagttggatattagattgctgctcacaaaagaag
cttgtccccttacagccaaagtacttcctcttcctatctgaagtaacaaggaagaagtta
caagaagaaattgacgagttctctgactcttactacatgtatattgatcttggagagttc
aaacagctcttaaacactattaatcggtcagaggatatcagtactattgatcattacagc
aaaaaatactgtccaaaggatgagtggtctgtctttattggatgctccatatatttccac
actgcaataccatcagtgaaaggggactggaaagttctattgcaacttgctttgagaaga
ttcaaggttgaagttctcatgggcggtggtagagttactgataaacttacttgtgcaacc
catttagttgtcttgtcagttccaggatatgatgccgaatttgatgagatacagagatgt
tttacttcagtggataggaggtttctccagagcaagaggttgcatataataaaatcccat
tggtttgaagattgtctggacaataacaaaagattaccagaagaaagttacagcttgagg
ccctctgcaatagaagagtcaacatctgaaaatggtgaaaatgacatcttagaggctcac
tttggtggagacaatgtacaagaccagaatgtaccctctgaaaaggaaaatagacagaga
agtgcaaaagctgctcatgaacacagtttggccacggtgtcccatgagaatgttggccca
aggaagagaggaagacctgcagggagaggtgttaaaaatgttaagatggctggcaacaaa
gcccaaagagcacggccacgcactgtgagaaagcgtgcaaaaataagcgagtatgaatcg
gacaaaagtgattctcatgacaatgaaccagaagagcaggaggatgacaccggagaagca
agttttgatatttacaatagacatttggaacctcaggaggtcgagcaacaggccaatgtc
caagttgctgaaacagaagaaagttctgaaccaaacagggcagtgcatgatttgaggaat
agtagtgagagtgaaagaatgtatgttccagaaataaaaatggcagataggaccaatgac
caaaacagtgaattggctaaagaaattgaaaatcgggctgatcccatgttatttgacaag
attccgagccttgctaccgccaagaaagttgaggacactaagcattgtgatctaaaagaa
gagaggccagcagcagcagcagaaagcagtagcaccaatactgcagaacctacaatcact
aagaaaaagaaagttagctacaaggacgttgccaatgacctgctcaaagattggtag
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