Arachis duranensis: 107486759
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Entry
107486759 CDS
T04300
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
adu
Arachis duranensis
Pathway
adu03013
Nucleocytoplasmic transport
adu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107486759
09122 Translation
03013 Nucleocytoplasmic transport
107486759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adu03019
]
107486759
03041 Spliceosome [BR:
adu03041
]
107486759
Messenger RNA biogenesis [BR:
adu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107486759
Spliceosome [BR:
adu03041
]
Complex C
Other components
EJC/TREX
107486759
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107486759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
107486759
NCBI-ProteinID:
XP_015962820
UniProt:
A0A6P4D806
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Position
1:complement(41286294..41293465)
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AA seq
604 aa
AA seq
DB search
MEVFKRAIMQPGPPEHFALLTVQEVIKPQKQTKLAQDENQLLENILRMLLQEYVSSAVQS
GEKIMHFGQSIDATETTQGLIPRLLDIVLYLCEKEHIEGGMIFSLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPLGICIDFKFYETFWGLQEYFSNPTITHAPSKWQKFASS
LSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQCLI
LFDYLKAPGKGDKDLPSESMKDEISSCEARVKRLLELTPPKGKEFLHKIEHILEREKNWV
WWKRDGCLPYEKQPTEKKAIQDGTKKRKPRWRLGNKELSQLWKWADQNPNALTNPQRVQT
PSIMDYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGVEGVV
PLELLPPDVRSKYQAKPNERGKRSKKEEAKGTAHQVDENQMSTHATEVDVEGIRTDMTAT
PMEFDAASIPGAQGETPTPEELQKQSSDTDGGQEAGQLDADAEVEAGIIDGETDADVDLD
AKDD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtttaaaagggctataatgcagcctgggccacctgagcatttcgctttactg
acagttcaagaagtcatcaaacctcagaagcaaacgaaattggcccaagatgagaaccag
ttgctagaaaacattctacgcatgctacttcaggaatatgtgtcatcggcagtacagtct
ggggagaaaataatgcactttgggcaatcaattgatgctactgaaactactcaaggcctc
attcctcgtcttcttgatatagtactatatctttgtgagaaagaacatatagaaggtggt
atgattttttcactgttggaagacttgacagaaatgtctacaatgaaaaactgcaaagat
atttttggttatatagagagcaaacaagatatattagggaagcaagaactttttgctcga
ggaaagcttgtgatgctgagaacctgcaatcagctcctacgccggctgtccaaggcaaat
gatgtggtgttttgtggaagaattctcatgtttttggctcatttctttccattatcagag
agatcagccttaaacatcaaaggagtatttaacacatcaaatgaaacaaaatatgagaaa
gaacccctaggcatatgtattgatttcaagttttatgagactttctggggattacaggaa
tatttttctaatccaactataactcatgctccttccaagtggcagaaatttgcgtccagt
ttgtcggttgtactgaatacatttgaagcacaacctttaagtgatgaagagggggatgct
aataatttggaggaagaagctgtcaattttagcataaaatatctcacaagcagtaaacta
atgggactggagttaaaggatccaagtttccgacgccacgttctggtgcaatgcctcatc
ttgtttgattatttaaaggcccctggaaaaggtgataaggatctgccatctgaaagcatg
aaagatgagatttcatcatgtgaggcgcgtgttaaaagacttcttgaactgactccaccc
aaaggaaaggaatttcttcacaaaattgagcatatattggaacgggaaaagaattgggtg
tggtggaaacgcgatggctgcctgccatatgaaaaacaaccgaccgaaaagaaagcaata
caagatgggaccaagaagcgtaagcctagatggagattgggtaacaaagaactctcccaa
ttgtggaagtgggcagatcaaaatccgaatgctttaaccaatcctcagcgtgttcaaaca
ccttcaattatggattattggaaacccttggctgaagatatggatccttctgctggaata
gaagctgaatatcaccacaagaataaccgggtttattgttggaagggtctacggctttca
gcacgacaggatttggagggtttttccaagtttaccgaccatggcgttgaaggggttgta
ccactggaacttttgccacctgatgttcgatctaaatatcaagctaaaccgaatgagaga
ggaaaacgtagcaaaaaggaagaagcaaaaggcacagctcatcaagttgatgaaaatcag
atgtctacacatgcaacggaggtagatgtggaaggcattagaactgatatgacagcgaca
cctatggaatttgatgctgcttccatccctggcgcacagggggaaaccccgacaccggaa
gaacttcaaaagcagagttctgacactgatggtggccaggaagcaggtcaattggacgct
gatgctgaagttgaggccggcatcatagacggagagacggatgcagatgttgatttagat
gctaaggatgattga
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