Acromyrmex echinatior (Panamanian leafcutter ant): 105143906
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Entry
105143906 CDS
T03917
Name
(RefSeq) histone deacetylase Rpd3-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03082
ATP-dependent chromatin remodeling
aec03083
Polycomb repressive complex
aec04213
Longevity regulating pathway - multiple species
aec04330
Notch signaling pathway
aec04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105143906
03083 Polycomb repressive complex
105143906
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105143906
04350 TGF-beta signaling pathway
105143906
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
105143906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aec03036
]
105143906
Enzymes [BR:
aec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105143906
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105143906
HDAC complexes
Sin3A-HDAC complex
105143906
BRAF-HDAC complex
105143906
REST complex
105143906
SHIP complex
105143906
MiDAC complex
105143906
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105143906
Heterochromatin formation proteins
Other heterochromatin formation proteins
105143906
Chromatin remodeling factors
NuRD complex
105143906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105143906
NCBI-ProteinID:
XP_011050777
UniProt:
F4WDF1
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAMQPFKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKFHSDDYIRFLRSIRPDNMGEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAA
VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDMGAGKGKYYAVNIPLRDGMDDESYESIF
VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGG
GYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLDK
IKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEIEEKMNLDERLPQRDLDKRIQHENEY
SDSEDEGEGGRRDNRSYKGSTKRLRLEKGQEMDMRIININSKKEDDMKSDLRENEKDEKV
NFLNEEIRKESGINI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcagccattcaagaagcgcgtctgttattactatgatagtgatattggaaat
tattattatggtcaaggacatcctatgaaaccacatcgtatacggatgacgcacaatcta
ctcttgaattatggtctttatagaaagatggaaatatatcgacctcataaagctacagca
gaagaaatgacaaaatttcatagcgatgactacatcagatttttgagatcaatacgacca
gacaatatgggagaatataataaacaaatgcaacgatttaacgtaggagaagattgccct
gttttcgatggtttgtacgaattctgtcaattatcagcgggtggatctgtagctgctgct
gttaaactcaataagcaagcctcagaaatttgtatcaattggggtggtggcttacatcat
gcaaagaagagcgaagcttctggtttttgctatgtaaatgatattgtacttgggatcttg
gaattactaaaataccatcagagagttttatatatcgacattgacgttcatcatggtgat
ggtgtagaagaagctttttatacaacggatagagtaatgacggtatcatttcacaaatat
ggcgagtatttccctggaacaggagatcttcgcgatatgggagcaggaaagggaaagtat
tacgcagttaatatacctttaagggatggtatggatgatgaaagttatgaatcgatattc
gttcctatcatctctaaagtgatggagacatttcaaccttctgctgttgttttacaatgt
ggagcagattcattaacaggcgatcgattgggatgctttaatttaactgtgagaggccat
ggtaaatgcgtagagtttgtgaagagatataatttacctttcttgatggtgggaggtggt
ggttatactatcagaaatgtctccagatgttggacatatgaaacttcggtggctctcgga
tgtgaaatcgctaacgagcttccatataacgattactttgaatattttggccctgacttt
aaattgcatattagtccttcaaatatgacaaatcaaaacacttccgaatatctcgataaa
attaaaacaagattgtttgaaaacctaagaatgctacctcatgcacctggcgtacaagtt
caggcaataccagaggatggtgccgttattgaagattcagaaattgaagagaagatgaat
cttgatgaaagactgcctcaacgtgatctagataaaagaatacaacatgagaatgaatat
agtgatagtgaagatgaaggtgaaggtgggcgaagagataacagatcatacaagggatct
acgaagcgactgcgtttggaaaaaggtcaagaaatggatatgcgtattataaacattaat
tcaaagaaagaagatgatatgaaatcagacctaagagaaaatgaaaaggatgagaaagta
aatttcctaaatgaagaaataagaaaagagagtggaattaatatctga
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