Acromyrmex echinatior (Panamanian leafcutter ant): 105152883
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Entry
105152883 CDS
T03917
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105152883
09122 Translation
03013 Nucleocytoplasmic transport
105152883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105152883
03041 Spliceosome [BR:
aec03041
]
105152883
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105152883
Spliceosome [BR:
aec03041
]
Complex C
Other components
EJC/TREX
105152883
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105152883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
105152883
NCBI-ProteinID:
XP_011065717
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAMFEGLRKDYSDYLQQYFKLSDVSLFQKKCIERCANDSDRKAAIDQALRDTLLVVLTEN
ASGNVRSLESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWK
EELFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NQTEFGLEKAEEDDLEQITKDDDKSESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKV
FSAHASNVLSAFASFKLEEQRSYPSTCIKMDTSMEDSHKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKTITEQVYTLLT
ETPPDGPTFAETVKNILKREEHWNTWKNEGCPPFKRPASDVSDEEPRKPRRPKRRIGDVI
RDAQTVGKYHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDD
KYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDTKL
ETEETPPSESTDQEFNEDVLKQESEQVDAESADIKARKLNKVTPEMVAKLSESLKNDWKK
LAIKFGYTNDEIAFFQSKTTPYEQCKTMLEIWAEEDEDASVENLVYILEGLKYTEALAVL
KS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcgaagggttaaggaaagactatagcgattatttgcagcaatatttcaag
ctgtcggacgtctcgttatttcaaaaaaagtgcattgaacgttgtgcaaatgacagtgac
agaaaagcggcgatcgatcaggcgcttcgagataccttgctagtcgtactgacggaaaat
gcttcgggtaacgtgcgttccctcgaatcatatatcacgttctgtatagaactatgcaga
aaggatcttgcgacagcgagtatgccagtgatgctactgggtgatatctttgattcaatg
acacttgatagatgtgaacagttatttacttttgtggagaataatgtcactgtatggaaa
gaagaattgttttttactgcctgtaaaaataacttgttgagaatgtgcaacgatctccta
aggagattgtcacgttcacagcaaactgtattttgtggtagaattctgttgttcctagca
aagttctttcctttctctgagagatctggcttgaatattgttagcgaatttaatctggaa
aatcagacagaatttggcttggagaaagcagaggaagatgatttagagcagataactaag
gatgatgacaagtcagaaagcaagataccaattgattataatttgtatagaaaattttgg
gcactacaagatttcttcagaaatccaaatcaatgttataataaaatgcactggaaggtc
ttttcagctcatgcgtctaatgtgctatcagcatttgcttcttttaaattggaagagcaa
cgtagttatccttctacgtgcatcaagatggatacttctatggaagactcccacaaagag
acgcattattttgctaaatatttgaccaatcaaaaattactggagttgcaactgtcagac
tccaatttcagacgatatgtattgctgcaatttctcattcttttccagtatctgaatagc
actgtaaaatttaaggccttccttgccagtggctatgagacaagtgagacacacgaactc
aagccggatcaagtggaatgggtgaagactattactgaacaagtttatactctactgact
gaaacaccacctgacggtcccacgttcgcggagactgtgaagaacatcttgaaacgcgaa
gagcattggaatacatggaagaatgaaggttgtccaccattcaaacgaccagcatcggat
gtcagtgacgaagagccacgaaaaccaagaagacctaaacgacgtatcggtgatgtaatt
agagatgcacaaacggttggcaaatatcacatgggaaatccagaacttactaaattatgg
aatttatgtccgaacaatctcgaggcatgcaaatctaaggatagagattttctgccgtct
ttagaaacatattttgaagatgccataatggaattggatcctgctgcaatggtcgatgat
aaatacaagaaggtgaacgatggtaattttggttggagagcgttaagactgttagcgaga
cgaagcccgcatttctttgttcacggaaattatcctataaataaattgcctgaatatctt
gaaacgatgattaagaagattgccaaagatcgtccacagacacagtccgatacgaaattg
gaaactgaggagacaccgccatcagaatctaccgatcaagaattcaatgaagacgtcttg
aaacaggaaagtgagcaggttgatgctgaaagtgctgatataaaagccagaaaattgaac
aaagtcacaccggaaatggtagcaaaattatcggaaagtttaaaaaatgattggaaaaaa
ttagcgataaaatttggttatacaaatgatgagattgctttcttccaaagcaaaacaacg
ccatatgaacaatgtaaaactatgcttgaaatctgggcggaagaggatgaagatgcatca
gttgaaaatttagtttatattttagaaggtttaaaatatacagaggcattagccgttcta
aaatcttaa
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