Anabaenopsis elenkinii: IM676_02010
Help
Entry
IM676_02010 CDS
T09787
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aee
Anabaenopsis elenkinii
Pathway
aee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM676_02010 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aee03400
]
IM676_02010 (mfd)
Enzymes [BR:
aee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM676_02010 (mfd)
DNA repair and recombination proteins [BR:
aee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
IM676_02010 (mfd)
BRITE hierarchy
Motif
Pfam:
DEAD
UvrB_inter
Helicase_C
TRCF
CarD_TRCF_RID
ResIII
AAA_22
PsbQ
UB2H
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
QOV23150
UniProt:
A0A7S6RE84
LinkDB
All DBs
Position
complement(429603..433055)
Genome browser
AA seq
1150 aa
AA seq
DB search
MAFSSIVRALRRSPLNTELLSQLNRQQQLRLNGIPRLPKGLIASALAQTGENNLLVVVPT
LEEGGRAHAQLEAMGWRTVHFYPTSAASGYEPFDPETEMTWGQMQVLADLIAGKTDSNLA
IVATPEALQPHLPPPAAFSSLSLTVESGTSFDLDSFSTKITKLGYERVPLVETEGQWSRR
GDILDIFPVSSSTPVRIEWFGDNIEKIRPFDPTTQRSALDKIDQITLTPTSFAPMIWEAL
ENQDLLPSDLSLLEGSRRFLGLAFPQPASLLDYLSENTLIAIDEPEQCHSHSDRWVENAQ
EQWEMMHREESRQIFPQIPKIHRCFDECLPEVNRFKTLYLSELAIENTGINLASRSLPVT
PHQFGKLAEILRQQRDLNHSIWLISAQPSRSVSLLQEHDCPAQFVPNPRDYQAMDKLQIN
HIPTAIKYSGLAELEGFILPTYRLVVITDREFYGQHSLATPGYIRKGRQASSKQVDPNKL
RQGDYVVHKSHGVGQFIKLESLTINHETRDYLVVKYADGILRVPADQLAALSRFRRTTDK
PPELHKMTGKVWENTKNRVRKAIKKLAVDLLKLYATRSQQQGYSYPQDMPWQEELEDSFP
YQPTTDQLKAVQDVKRDMESDRPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPT
TILTQQHYHTLKERFAPYPVTIGLLNRFRSSEERRTIQNRLATGELDVVVGTQQILGKNV
IFHDLGLLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITT
PPPSRRAIKTHLSPLKPEMIRMAISQELDRGGQIFYVVPRVEGIEEITAKLQEMIPKARI
AIAHGQMAESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQ
LRGRVGRAGIQAHAWLFYPPQQSLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNL
LGAEQSGQMEAIGFDLYMEMLEEAIREVRGQEIPKVDDTQIDLNLTAFIPSDYIPDIDQK
MSAYRAVAAAKTAEDLKYIAAEWGDRYGAIPASAHQLLRVMELKQIAKKLGFSRIKPENK
QHVILETPMEEPAWNLLAANLPAHLKTRFVYSPGKVTVRGLAVLKADQQLQNLLDAMYKI
QGGVPEVARV
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcttctattgtgcgtgccttgaggcgatcgcctctaaacacagaactactt
tcccaactaaatcgccaacaacagctgcggttaaacggtattcctcgcctccccaaaggt
ctgatagcctcagccttagcccaaactggggaaaacaacctattagtagtagttccgacc
ctagaagaaggggggcgcgcccatgcacaactagaagccatgggatggcgaacagtccac
ttttaccccacatcagcagcttcgggttacgaaccctttgacccagaaacagagatgacc
tggggacagatgcaggttttagcggatttaatcgccgggaaaacagacagcaacctagca
attgtcgccaccccggaagccttacaaccccacctaccaccacccgcagcttttagctcc
ttgtctctaacagtagagtcgggaaccagctttgacctagatagcttcagcaccaaaatt
actaaattgggttatgaacgagtcccactagtagaaacagagggtcaatggagtcgccgc
ggtgacatcctcgatatttttcccgtctcatcatcaaccccggtgagaatagagtggttt
ggtgacaacatcgagaaaatccgcccatttgacccgacaactcaacgttccgccctggat
aaaattgaccaaattaccctgacccccaccagcttcgcccccatgatctgggaagcgctg
gaaaaccaagacctgttaccatcggacttgtcactgttagaaggtagtcggcgtttttta
ggtttagccttcccccaaccagcatcactgttagattacttaagtgaaaataccctgatt
gctattgatgaaccagaacaatgtcatagccatagcgatcgctgggtagaaaatgcccaa
gaacaatgggagatgatgcatcgagaagaatctaggcagattttcccccaaatacccaaa
attcatcgctgttttgatgaatgtctcccagaggtaaataggtttaaaaccttatattta
tcagaattagccatagaaaacactggtataaacctggcgagtcgctccttaccggtaaca
ccccaccaatttggcaaactcgccgaaattctgcgccaacaacgggatcttaatcattcc
atttggttgatttccgctcaaccctcccgctccgtctccctactccaagaacacgactgt
cccgcccaatttgtccccaatccccgggactaccaagcaatggacaagttgcaaattaac
cacatacccacagcgatcaaatattccggtttagcggagctagaaggttttatcctccct
acataccgcctcgtagtcatcaccgaccgggaattttacggtcagcactccctcgccacc
ccgggatatatccgcaaaggtcgtcaagctagctctaaacaagtagacccgaacaaacta
cgtcagggggattatgtagttcacaaaagccacggagtcggtcagtttattaaactagaa
agcttaactattaatcacgaaacccgtgattatttagtggtcaagtatgctgatggtatc
ctcagagtcccagcggatcaactcgcagctttatctcggtttcgccgcacgacagataag
ccgccagaactacacaaaatgactggtaaggtttgggaaaatactaaaaaccgcgttcgc
aaggcgattaaaaagttagccgtagacctgctgaaattatatgccacccgctcccaacaa
caaggctatagttatccccaggatatgccttggcaagaagaattagaagactcttttccc
taccaacccaccacagaccaacttaaagcagtccaagatgtcaaacgagacatggaaagc
gatcgccccatggatcgtttagtttgtggagatgtaggttttggtaaaacagaggtagca
attcgggctattttcaaggccgttaccgctgggaaacaagttgcactacttgcacccacg
acaattttaacccagcaacactaccatactttgaaagaacgctttgccccttaccctgta
actattggcttgctgaatcgttttcgcagttctgaagaacgccgcaccatccaaaacaga
ttagccacaggagagttagatgtagtggtgggtacacagcaaattcttggtaaaaatgtc
atctttcacgatttaggtctgttggtagtggatgaggagcaacgctttggggtgaatcaa
aaggaaaaaattaaaaccttaaaaactcaagttgatgtcctcaccctttccgctaccccc
attccccgcaccttatatatgtccctctcaggaattcgggaaatgagtttaatcaccacc
ccacccccctccagaagagctattaaaacccacttatctcccttaaaaccggagatgatc
cgcatggcaattagtcaggaattagacagaggagggcagatattctatgtagttcctcgg
gtagaaggcattgaggaaataacggcgaaattacaggaaatgatccccaaggcgcggatt
gcgatcgcccatggtcaaatggcagaaagcgaactagaatcaaccatgctcacctttagt
aatggagacgcagatattctagtttgtacaactatcattgaatctgggttagatatcccc
cgggtcaacacgatattaattgaagacgcccaccgcttcggcttatcccaattataccag
ttacgtggtcgggtaggacgggcaggaatacaagcccacgcctggttattttatcctcca
caacaaagcctctccgacgcagcacgccaaagactgcgcgccattcaggaatttacgcaa
cttggttcagggtatcaactcgccatgcgtgacatggaaattcggggagtgggtaacctc
ctgggtgcagaacaatcaggccaaatggaagccatcggctttgatttgtatatggaaatg
ttagaagaagccattagagaggtgcgcggtcaagaaatacccaaggtggatgatactcaa
attgacctcaacctcaccgcatttattccctccgattatatcccggatatagatcaaaaa
atgagtgcttaccgggcagtagcagccgcaaaaactgcggaagatttaaaatatattgcc
gcagaatggggcgatcgctatggtgctataccagcgtctgctcatcaactgctgcgggta
atggaactcaaacagatagccaaaaaattaggatttagtcgcattaaaccagagaataaa
caacacgtgattttagaaacacccatggaggagccagcttggaacctcctagcagccaat
ttacccgcacatctcaaaacccgctttgtttactcccccggtaaagtcacagtcaggggt
ttagcagtcctcaaagccgaccagcaactgcaaaatctactagatgcaatgtataaaatc
caaggtggtgttccagaggtggccagggtttaa
DBGET
integrated database retrieval system
