Aeromonas sp. 2692-1: E5E97_18545
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Entry
E5E97_18545 CDS
T08798
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aej
Aeromonas sp. 2692-1
Pathway
aej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5E97_18545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aej03019
]
E5E97_18545
03009 Ribosome biogenesis [BR:
aej03009
]
E5E97_18545
Enzymes [BR:
aej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E5E97_18545
Messenger RNA biogenesis [BR:
aej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5E97_18545
Ribosome biogenesis [BR:
aej03009
]
Prokaryotic type
rRNA helicases
E5E97_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJT14718
LinkDB
All DBs
Position
complement(3932596..3934524)
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AA seq
642 aa
AA seq
DB search
MLAACLNLEESMSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLL
GQAQTGTGKTAAFALPLLSRLEAGNRNTQILVLAPTRELALQVAEACQRYAHHMPDFHVL
PIYGGASYETQTRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFI
DDVDWIMEQCPAGRQVALFSATMPEQIRRVAQKHLKQPKEIKIASKTATATTIRQRYWQV
TGLHKLDAMTRLLEVEPYEALLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERT
VDKLRQGQLDILIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAIL
FVAPRERRMLRAIEHATRQAIEPMKMPSTEDINQHRLTKFKERIRETMMGEELEIYVNLV
NELIEEDSADPLELAAALAKLVQGDQPLLLDDSIPDPVFNAGNDRGGFERRDFNDRGGRD
FADRGDRPARRMPSLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRF
IGNIDIADDFSTVDLPKGMSADVLEVIKKARVCQRPLQISRYTEVPAGSNTAPRPPRGDR
PFRGDRPFNKDRRPQGDRPFNKDRREGGFDKGRKFGGKRRDS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgttagccgcctgccttaatctggaagaatctatgtctgataccgaacaactgcccctt
tttagtgagcttggactggccgcgcctgtactgaaagcgctgcaggacgtgggctatgag
cgcccgtcccccatccaggccgcagcaattccccacctgatggcgggccacgatctgctg
gggcaggcgcaaaccggtacagggaagaccgctgcttttgccttgcctctgttgtctcgt
ctggaagctggtaaccgcaacacccagatcctggtgctggcaccgactcgtgaactggcc
ctgcaggtggctgaagcgtgccaacgctatgcccaccacatgcctgatttccacgtgctg
cccatttacggcggcgcctcctacgaaacccagacccgcgcactgcgccgtggtgctcag
gttgtcgtgggtaccccgggccgcgtgatggacctgatccgtcgcaagaacctggacctc
tccggcctgaaagccctggtgctggacgaagcggacgagatgctgcgcatgggcttcatc
gacgacgtggactggatcatggaacagtgcccggccggtcgtcaggttgccctgttctcc
gccaccatgccggagcagatccgtcgtgtggcccagaagcacctgaagcagcccaaagag
atcaagatcgcctccaaaactgcgaccgctaccactatccgccagcgttactggcaggtg
accggtctgcacaagctggacgccatgacccgtctgctggaagtcgaaccctacgaagcc
ctgctggtgttcgtacgcaccaagaacgccgccgaagaactggctggcaagttggccgcc
cgtggtcacgcctgtgaagcgctgcacggtgacatcccgcagaagctgcgtgagcgtacc
gttgacaagctgcgtcagggccagctggacatcctgatcgccaccgacgtggttgcccgt
ggtctggacgttgagcgcatcacccacgtggtgaactacgacatcccctacgacaccgaa
tcctacgttcaccgtatcggccgtaccggccgtgccggtcgcaagggtgaagccatcctg
ttcgtggcaccgcgcgagcgtcgcatgctgcgcgccatcgagcacgcaacccgtcaggcc
atcgagccgatgaagatgccgagcaccgaggacatcaaccagcaccgtctgaccaagttc
aaggagcgcatccgcgaaaccatgatgggcgaagagctcgagatctacgtgaacctggtg
aacgagctgatcgaagaagactctgccgatccgctggagctggccgccgcactggccaag
ctggtacagggcgaccaaccgctgctgctggatgactccattccggatccggtgttcaac
gccggcaacgatcgcggtggtttcgagcgtcgtgacttcaacgaccgtggtggccgtgat
ttcgccgaccgtggcgatcgcccggctcgtcgcatgccgtccctggagccgcgtccgctc
aaagacaacccagacgtggagatggagcgctaccgcgtagacgtgggtgcccatcacggc
gtcaagccgggccagatcgtgggtgccatcgccaacgaagcgaacatcgagagccgcttc
atcggcaacatcgacatcgccgatgacttctccaccgtcgatctgcccaagggcatgagc
gccgacgtgctggaagtgatcaagaaagcccgtgtctgccagcgtccgctgcagatcagc
cgctacaccgaagtgccggccggcagcaacactgctccccgtccgccccgtggtgatcgt
ccgttccgtggcgaccgtcctttcaacaaggatcgccgtccgcagggtgaccgtcccttc
aacaaggatcgccgtgaaggcggtttcgacaagggtcgcaaattcggtggcaagcgccgc
gacagctaa
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