Aeromonas encheleia: NCTC12917_02458
Help
Entry
NCTC12917_02458 CDS
T06531
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ael
Aeromonas encheleia
Pathway
ael03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ael00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12917_02458 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ael03019
]
NCTC12917_02458 (deaD)
03009 Ribosome biogenesis [BR:
ael03009
]
NCTC12917_02458 (deaD)
Enzymes [BR:
ael01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12917_02458 (deaD)
Messenger RNA biogenesis [BR:
ael03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12917_02458 (deaD)
Ribosome biogenesis [BR:
ael03009
]
Prokaryotic type
rRNA helicases
NCTC12917_02458 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
VEG96875
UniProt:
A0A3S4UCT1
LinkDB
All DBs
Position
1:complement(2654247..2656145)
Genome browser
AA seq
632 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQVLVLAPTRELALQVAEACQRYAKHMPDFHVLPIYGGSSYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMEQCP
ATRQVALFSATMPDQIRRVAQKHLKQPKEIKIITKTSTAPTIRQRYWQVTGLHKLDAMTR
LLEVEPYEAVLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRMTKFKERIRETMMGEELEIYVNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSITEPASDRAGREFERRDFGDRAPRDFADRGDRPARRMP
SLEPRPLKDNPDVEMERYRVDVGANHGVKPGQIVGAIANEANIESRFIGNIDIADDFSTV
DLPKGMTADVLEVIKKARVCQRPLQISHYTEVPAGSNTAPRPSSDRPAFNKDRPFNKDRR
PSGDRPFNKSGERREGGFNKDRKFGGPKRRDS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaggacgtgggctatgagcgcccgtctcccatccaggccgcagcaatcccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctctgttgtctcgtctggaagctggtaaccgtaacacccaggttttg
gtgctggcaccgacccgtgaactggcgctgcaggttgctgaggcgtgccaacgttacgcc
aagcacatgccggacttccatgtcctgccgatctacggtggttcctcctacgaaacccag
acccgcgccctgcgtcgtggtgctcaggttgtcgtgggtaccccgggtcgtgtgatggac
ttgatccgtcgcaagaacttggatctctccggtctgaaagccttggtgctggatgaagcc
gatgaaatgctgcgtatgggcttcatcgacgacgtggactggatcatggaacagtgcccg
gccacccgtcaggttgcccttttctccgctaccatgccggaccagatccgtcgtgttgcc
cagaagcacctgaagcagccgaaagagatcaagatcatcaccaagacgtccactgcaccg
accatccgccagcgctactggcaggtgaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtcgagccctacgaagccgtactggtgtttgtacgcaccaagaacgcggcc
gaagagctggccggcaagctggccgcccgtggtcacgcctgtgaagccctgcacggtgac
attccgcagaagctgcgtgagcgtaccgtcgacaagctgcgtcaaggccagctggacatc
ctgatcgccaccgacgtcgtcgcccgtggtctggacgttgagcgcatcactcacgtggtg
aactacgacattccgtacgataccgaatcctacgttcaccgtatcggccgtaccggccgt
gccggtcgtaagggtgaggccatcctgttcgtggctccccgcgagcgccgcatgctgcgc
gccatcgagcacgctactcgtcaggccatcgagccgatgaagatgccgagcaccgaggac
atcaaccagcaccgcatgaccaagttcaaggagcgcatccgggaaaccatgatgggcgaa
gagcttgagatctacgtgaacctggtgaacgagctgatcgaagaagattctgccgatccg
ctggagctggctgccgccctggccaagctggtgcagggtgaccaaccgctgctgctggat
gactccatcactgaaccggcaagcgatcgtgctggccgtgagttcgagcgccgtgacttc
ggtgatcgtgctccccgtgatttcgccgaccgtggcgatcgtcctgcccgtcgcatgcct
tccctggagccgcgcccgctcaaagacaatcctgacgtagagatggagcgttaccgcgta
gacgtgggtgctaaccacggtgtcaagccgggccagatcgttggcgccatcgccaacgaa
gcgaacatcgagagccgtttcatcggtaacatcgatatcgccgatgacttctccaccgtc
gatctgcccaagggcatgaccgccgatgtgctggaagtgatcaagaaggcccgtgtctgt
cagcgtccgctgcagatcagccactacaccgaagtgccggccggtagcaacactgctccc
cgtccgtccagcgatcgtcccgccttcaacaaggaccgtcctttcaacaaggatcgccgt
cccagcggtgaccgtccgttcaacaagagcggggagcgccgtgaaggtggcttcaacaag
gatcgcaagttcggtggccccaagcgccgcgacagctaa
DBGET
integrated database retrieval system
