Aeromonas sp. CU5: CK911_04995
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Entry
CK911_04995 CDS
T05327
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK911_04995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aem03019
]
CK911_04995
03009 Ribosome biogenesis [BR:
aem03009
]
CK911_04995
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK911_04995
Messenger RNA biogenesis [BR:
aem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK911_04995
Ribosome biogenesis [BR:
aem03009
]
Prokaryotic type
rRNA helicases
CK911_04995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ATL92229
UniProt:
A0A291TGH1
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All DBs
Position
1110304..1112193
Genome browser
AA seq
629 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQVLVLAPTRELALQVAEACQRYAKHMPDFHVLPIYGGSSYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMDQCP
STRQVALFSATMPDQIRRVAQKHLKQPKEIKIVSKTSTAPTIRQRYWQVTGLHKLDAMTR
LLEVEPYEAVLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEQATRQAIEPMKMPSTEDINQHRMTKFKERIRETMMGEELEIYHNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSIPDPLLNASNDRGGRDFERRDGGRDFGGRDFADRGDRP
ARRMPSLEPRPLKDNPDVEMERYRVDVGANHGVKPGQIVGAIANEANIESRFIGNIDIAD
DFSTVDLPKGMTGDVLEVIKKARVCQRPLQISRYTEVPAGSNTASRPPRSDRPFNKDRRP
SGDRPFNKGGDRREGGADKRKFGGKRREG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaggacgtgggctatgagcgcccgtcaccgatccaggccgcagcaattccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctcttttatctcgtctggaagctggtaaccgcaacacccaggttttg
gtgttggcacctacccgtgaactggcgctgcaagttgctgaggcgtgccaacgttacgcc
aagcacatgcctgatttccacgttctgcctatctacggcggttcctcttacgaaacccag
acccgcgcactgcgtcgtggcgctcaggttgttgtaggtactcctggccgtgtgatggac
ttgatccgtcgcaagaacctggacctctccggcctgaaagccctggttctggacgaagct
gatgaaatgctgcgtatgggcttcatcgacgacgttgactggatcatggaccagtgcccg
agcacccgtcaggttgccctgttctctgccaccatgccggaccagatccgtcgtgttgcc
cagaagcacctgaagcagccgaaagagatcaagattgtctccaaaacctccactgccccg
accattcgtcagcgctactggcaggtaaccggtctgcacaagctggacgctatgacccgt
ctgcttgaagtagagccgtacgaagcagtactggtttttgtgcgtaccaagaatgctgcc
gaagagctggctggcaagctggccgctcgtggccacgcttgtgaagcgctgcacggtgac
atcccgcagaagttgcgtgagcgtaccgttgacaagctgcgtcaaggtcaactggacatc
ctgatcgcgaccgacgtagttgcccgtggtctggacgttgagcgtatcacccacgtggtg
aactacgacatcccttacgataccgaatcctacgttcaccgtatcggccgtaccggtcgt
gctggccgtaagggcgaagccattctgtttgtggctccccgtgagcgtcgtatgctgcgt
gccatcgagcaagcaactcgtcaggccatcgagccgatgaagatgccgagcaccgaagac
atcaaccagcaccgtatgaccaagttcaaagagcgcattcgtgaaaccatgatgggcgaa
gagcttgagatctatcacaacctggtgaacgagctgatcgaagaagattctgccgatccg
ctggaactggctgccgcactggccaagctggttcagggtgaccaaccgctgctgctggat
gactccatccctgatccgctgctgaacgccagcaatgatcgcggtggtcgtgactttgag
cgtcgtgatggtggccgtgattttggtggtcgtgacttcgctgaccgtggcgatcgtcct
gcccgtcgtatgccttccctcgagccgcgtccgttgaaggacaacccggatgtcgagatg
gagcgctatcgcgtagacgtgggtgctaaccacggcgtcaagccgggccagatcgttggc
gctatcgctaacgaagcgaacatcgagagccgtttcatcggtaacatcgacatcgctgat
gacttctccaccgttgatctgccgaagggtatgaccggcgacgtgctggaagtgatcaag
aaagctcgcgtttgccagcgtccgctgcagatcagccgctacaccgaagtacctgccggt
agcaacactgccagccgtccgccgcgcagcgatcgtcctttcaacaaggatcgtcgtccg
agtggtgaccgcccgttcaataagggtggggatcgccgtgaaggtggtgctgacaagcgt
aaatttggtggcaagcgccgcgaaggttaa
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