Aeromonas sp. CU5: CK911_16975
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Entry
CK911_16975 CDS
T05327
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK911_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aem03019
]
CK911_16975
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK911_16975
Messenger RNA biogenesis [BR:
aem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK911_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATL94312
UniProt:
A0A291TMF7
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All DBs
Position
3777091..3778383
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AA seq
430 aa
AA seq
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MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLTTPRLVNQPRAIIMAPTRELAVQIYNDADSIAASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQVEPEQMTGVRIQEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHICEDVQAWLENDGHRAGLLTGDVPQKKRMKILE
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHAIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGSNNS
NNRRRPPRKS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacccccatccaggcactgtctctg
ccactgctggtagaaggtcatgacctcgccggtcaggctcagacaggaaccggcaagacc
atcgccttcctggccgccaccttcaactatttgctgactcacccactgaccactccccgt
ctggttaatcaacccagagccatcatcatggcacccacccgggaactggcagtacagatt
tacaacgatgccgacagcatcgctgcctctaccggcctgaaactcggcctcgcctacggt
ggcgaaggttacgacaagcagttggccgtgctggagcagggcgttgacatcctgatcggc
accactggtcgcatcatcgactacttcaagtccaaggtgatcgatctgagcaatattcag
gtcgtggtactggacgaagcggatcgcatgttcgatctgggcttcatcaaggacatccgc
ttcctgttccgccgcatgcctgccccgaccgagcgtctaagcatgctgttctccgcgacc
ctctccctgcgcgtgcaggagctggcctacgagcacatgaaccacccggaacatgtgcag
gtagagccggagcagatgacaggagtacgcattcaggaagagctgttctacccctccaat
gaagacaagatgctgctgttgctctctctgatggaagaggagtggccagaaaaagccatc
gtgttcgccaacaccaagcatatctgtgaagacgtgcaggcgtggctggagaatgacggc
caccgcgcaggtctgttgactggcgacgtgccgcagaagaagcggatgaagatcctggaa
gacttcaccaaagggacgctggacatcctggtcgctaccgacgtggctgcccgtggtctg
cacatccctgacgtgacccacgtcttcaactatgacctgcccgacgacgccgaagactat
gtgcaccgtatcggtcgtaccggtcgtgccggcaagagcggccactccatcagcctggcc
tgtgaagactatgccttcaacctgccagccatcgaggagtacatccaccacgctatcccg
gtcagcaaatatgatcgtgaagcactgctggatgatgtgactgcgccgaaacgtgttgtt
cgcaaccgccagccggtcaaccgcaacatgcgtgaccgtcagggtggcagcaacaacagc
aacaaccgtcgtcgtccgccgcgcaagagctaa
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