Aestuariibaculum sp. YM273: RBH94_08530
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Entry
RBH94_08530 CDS
T09314
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aest
Aestuariibaculum sp. YM273
Pathway
aest02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aest00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBH94_08530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aest03021
]
RBH94_08530
Transcription machinery [BR:
aest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBH94_08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_11
HTH_24
HTH_10
HTH_40
HTH_23
HTH_AsnC-type
HTH_5
HTH_Tnp_ISL3
NagA_C
HTH_38
DUF6362
HTH_17
HTH_DeoR
PCI
MarR
HTH_29
Thump_like
Motif
Other DBs
NCBI-ProteinID:
WMI64116
UniProt:
A0AA51GKJ4
LinkDB
All DBs
Position
1994588..1995154
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AA seq
188 aa
AA seq
DB search
MLSQDSDIVDRLKKGDKKALTELYDSYWKPLYISSYNLLKNKELCEEIIQDVFIDVWNYR
ENLQIKISLKSYLYACVRYKVFSEFRKNKIQRVELFEGLNDRFQYATPETKLMHEELVMQ
IDAIVKTLPARCQEVYILSRNQQLSHKEIAEKLGISTKTVENHITLALRTIRSSLGYLLS
IEILYFIH
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgctctcacaggattcagatatagtagatcgtcttaaaaaaggggataagaaggcttta
accgagctttatgatagttattggaagccattatacattagctcttataatcttttaaaa
aataaggagctttgtgaagaaattattcaggatgtttttattgatgtctggaattataga
gaaaatcttcagataaaaatttctctaaaatcatatctatatgcttgtgtaagatataag
gtgtttagcgaattccgaaaaaataaaattcagcgagttgaattgtttgaaggcttaaac
gatcgatttcagtacgctacgcccgaaacaaaattgatgcacgaggagttggtgatgcaa
attgatgctattgtaaaaacattgcctgcgcgttgccaggaggtatatatcttaagtcgt
aaccagcaattaagtcataaagaaatagccgaaaaattaggcatttcaacaaaaaccgtt
gagaatcatatcacactggctttaagaactattcgttcgtctctagggtacttgttaagt
atagaaatactatattttatacactag
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