KEGG   Aestuariibaculum sp. YM273: RBH94_08530
Entry
RBH94_08530       CDS       T09314                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
aest  Aestuariibaculum sp. YM273
Pathway
aest02020  Two-component system
Brite
KEGG Orthology (KO) [BR:aest00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RBH94_08530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aest03021]
    RBH94_08530
Transcription machinery [BR:aest03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RBH94_08530
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF GerE HTH_11 HTH_24 HTH_10 HTH_40 HTH_23 HTH_AsnC-type HTH_5 HTH_Tnp_ISL3 NagA_C HTH_38 DUF6362 HTH_17 HTH_DeoR PCI MarR HTH_29 Thump_like
Other DBs
NCBI-ProteinID: WMI64116
UniProt: A0AA51GKJ4
LinkDB
Position
1994588..1995154
AA seq 188 aa
MLSQDSDIVDRLKKGDKKALTELYDSYWKPLYISSYNLLKNKELCEEIIQDVFIDVWNYR
ENLQIKISLKSYLYACVRYKVFSEFRKNKIQRVELFEGLNDRFQYATPETKLMHEELVMQ
IDAIVKTLPARCQEVYILSRNQQLSHKEIAEKLGISTKTVENHITLALRTIRSSLGYLLS
IEILYFIH
NT seq 567 nt   +upstreamnt  +downstreamnt
atgctctcacaggattcagatatagtagatcgtcttaaaaaaggggataagaaggcttta
accgagctttatgatagttattggaagccattatacattagctcttataatcttttaaaa
aataaggagctttgtgaagaaattattcaggatgtttttattgatgtctggaattataga
gaaaatcttcagataaaaatttctctaaaatcatatctatatgcttgtgtaagatataag
gtgtttagcgaattccgaaaaaataaaattcagcgagttgaattgtttgaaggcttaaac
gatcgatttcagtacgctacgcccgaaacaaaattgatgcacgaggagttggtgatgcaa
attgatgctattgtaaaaacattgcctgcgcgttgccaggaggtatatatcttaagtcgt
aaccagcaattaagtcataaagaaatagccgaaaaattaggcatttcaacaaaaaccgtt
gagaatcatatcacactggctttaagaactattcgttcgtctctagggtacttgttaagt
atagaaatactatattttatacactag

DBGET integrated database retrieval system