Asticcacaulis excentricus: Astex_0166
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Entry
Astex_0166 CDS
T01378
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
aex
Asticcacaulis excentricus
Brite
KEGG Orthology (KO) [BR:
aex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aex03016
]
Astex_0166
Enzymes [BR:
aex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Astex_0166
Transfer RNA biogenesis [BR:
aex03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Astex_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADU11867
UniProt:
E8RNV4
LinkDB
All DBs
Position
1:176352..177764
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AA seq
470 aa
AA seq
DB search
MFGLEKGRLKPHKHRMSETASAASKKLHIKTYGCQMNVYDSERMADLLRPLGYAVSDQAE
GADLVLLNTCHIREKAAEKVYSEIGRLKVMRQEKEARGEGRMTIAVAGCVAQAEGEEIMN
RAPAVDLVVGPQAYHQLPELIARTTRAKGERLKADFAPEDKFDALSTERQASGPTAFLTV
QEGCDKFCTFCVVPYTRGAEWSRPVASILEEARSLASKGVREITLLGQNVNAYNGREADG
EESTLPRLMQALSEIEGLDRIRYTTSHPNDMTDELIRAHAENPAVMPYLHLPVQSGSDKI
LRAMNRKHGRQAYIDLIARLKAAVPNIALSGDFIVGFPGETEKDFEDTMDLIRTVGYASA
FSFKYSKRPGTPAAAMPGQVDEAVADGRLQALQALINEQAQAFKASLVGQTIDVLFEKPG
RYGQQAVGRSPWLHAVFAEDAAHLIGQIVPVKIVGVGNNSLIGELEKVHA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgtttggccttgaaaaaggacgcctgaaacctcataagcaccgcatgagtgaaaccgca
tccgccgcatccaaaaagctgcacatcaaaacctacggctgtcagatgaacgtctatgac
agtgagcgcatggctgatcttttgcgtccactgggctatgccgtgtccgatcaggccgaa
ggcgctgatctcgtgctgctgaacacctgccacatccgcgaaaaggcggccgagaaggtc
tattccgagatcggtcgtctgaaggtgatgcgtcaggaaaaggaagcgcgcggcgaagga
cgcatgacgattgcggtcgcaggctgcgtggcgcaggctgagggcgaagagatcatgaac
cgcgcgccggccgtcgatctggtcgtgggtccgcaggcctatcaccagttgcctgagctg
attgcccgcaccacccgcgccaagggtgagcgcctgaaagccgacttcgcaccggaagac
aagtttgatgccctttcgactgagcgtcaggcgagcggcccgacggcctttctgaccgtt
caggagggttgcgacaagttctgcaccttctgcgtggtgccctatacccgcggggccgaa
tggtcgcgcccggtcgcctcgatccttgaagaagcgcgttcgctggcctcgaaaggcgta
cgcgaaatcacgcttctggggcaaaacgtcaatgcctacaacggccgtgaggcggatggt
gaggaatccaccctgccgcgcctgatgcaggctctgtcggagattgaggggctggaccgt
atccgctacaccacctcgcaccccaacgatatgaccgatgagctgatccgcgcccatgcg
gaaaaccccgcggtcatgccttatctgcacctgcctgtgcagtcgggatcggacaaaatt
ctgcgagccatgaaccgcaagcacgggcgtcaggcctatatcgacctgattgcgcgcctg
aaagccgctgtgccaaacatcgccctgtccggcgacttcatcgtcggcttccccggcgag
acggaaaaagatttcgaagacacgatggacctgatccgcaccgtcggttacgcctcggcc
ttctcgttcaaatactcgaagcgtccaggcaccccagccgccgccatgccagggcaggtc
gatgaggcggtggccgatggccgtcttcaggcgcttcaggccctgatcaatgagcaggcg
caggcctttaaggcttcgcttgttgggcaaaccatcgacgtgctgtttgaaaagccgggt
cgctatggtcaacaggccgtcgggcgttcgccctggctgcacgcggtgtttgccgaagac
gcggcgcacctgatcggtcagatcgtgccggtgaagatagtgggcgtggggaataattct
ctgatcggggaattggaaaaggtacacgcttga
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