Alicyclobacillus fastidiosus: NZD89_18975
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Entry
NZD89_18975 CDS
T08690
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NZD89_18975 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afas03400
]
NZD89_18975 (priA)
Enzymes [BR:
afas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NZD89_18975 (priA)
DNA repair and recombination proteins [BR:
afas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NZD89_18975 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
AAA_30
Helicase_C_2
AAA_16
YjhX_toxin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WAH40402
LinkDB
All DBs
Position
complement(3833983..3836412)
Genome browser
AA seq
809 aa
AA seq
DB search
MSQVGTVVSVFIDSPGLFLDKPFDYSVQSELAQSVEVGQRVFVSFGHQFKSGVIWQVHHK
VAIGEKVKPILDLVDDQPVLTPEQCSLASWLCERYACTMYDAITAILPGAFRVKGDIVIQ
PVQTALVPDDITATPLWGSIARDKPTERALFAQFGKSARAQVAAWEKAGYLRRRLIVKEE
VQAFEVSWLVRQRPAQELQAAAEVRRKRASKQARLLEALARAEEIEWKRSEFSRDTVEAL
VREGWLIEQVRPKSRLKWAKQKVAAPPELTESQARALAHIREQLDAGTARTVILHGVTGS
GKTEVYIRSIEDVLARGLSAIVLVPEIALTPQMVGRFYARFGERIAVLHSALTLGERRDE
WGRILRGEASIVIGARSAVFAPVQNLGLLIVDEEHEPSYKQEEAPHYDARDVALERASSF
GALTVFGSATPSLQALYLAEHGQARMVTLPIRVNQRPLPAVEIIDMRDELRAGNKSLFSD
RLADEIEKTIALGQQVILFLNRRGFASSMLCRACGEGMHCPHCDISLTVHRDAHGMRLVC
HYCGYEEQSPVECPACGERALRSFGIGTEQIEQSLKETWPQLRALRMDVDTTRKKGSLKH
IVEQFEQRQADVLIGTQMIAKGLDFPHVRLVGVMAADTMLEVPDYRANERTFQLLTQVAG
RAGRAETDGVTIIQTYRPDHFAVLAAARHDFPSFYREERMQREVFSYPPFCEMAVFLATH
SDEVLSRGAAARFERELRRASLPDGTVVLPASPSGIRRIEDKYRYQVVLKYQRWEDVRDI
VDPAFRLVKQRMNEYGGACRLDVNAQRIG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtcggtaccgtggtcagtgtgttcattgattccccgggcctgtttctggac
aaaccgtttgactacagcgttcaaagcgagctggcccagtccgtcgaggtgggccagcgc
gtatttgtgtcgtttggccaccagttcaagtcgggcgtcatttggcaggtgcatcacaaa
gtggcaatcggggagaaggtcaagcccattctcgatctcgtcgacgaccaaccggtcctc
acacctgagcagtgcagtttggcgagctggctgtgcgagcggtacgcctgcacgatgtac
gatgcaataacggccatcttgccaggtgcatttcgggtgaagggcgatatcgtcattcaa
cctgtacaaacggcgctggtgcccgacgacatcacggcgacgcctctgtggggctcgatt
gcgcgggacaagccgacggagcgcgcgctcttcgcccagtttgggaagtcggcgcgggcg
caagtggcagcctgggagaaggctggctatctccggcggcgcctcatcgtcaaggaagag
gtgcaagccttcgaggtatcgtggctcgtgcgccaacgcccggcacaggaattgcaggcc
gcggcggaggttcggcgaaaacgcgcgtcaaaacaggctcggttgctcgaggccttggcg
cgtgcggaagaaatcgagtggaagcggtctgagttcagccgagacacggtcgaggcgctc
gttcgagaggggtggctcatcgaacaggttcgccccaaatcgcgattgaagtgggcaaag
cagaaggtcgctgcgccgccggaactgacggaaagccaagctcgggcactcgcgcacatc
cgcgagcaactcgatgcgggtacggcccgcaccgtcatccttcacggggtcaccgggagc
ggcaagaccgaagtctatatccgctcgatagaagacgtccttgcgcgggggttgtcggcc
atcgtcctcgtgccggaaatcgccctcacgccgcagatggtcggccgtttttacgccaga
ttcggcgagcgcatcgcggtactgcactcggcgctgacgctcggcgagcgaagagacgaa
tggggccgcatcttacgcggggaagcctcgatcgtaatcggggcgaggtcggctgttttt
gcccccgtgcaaaacttaggactcctcatcgtcgacgaggaacacgaaccttcctataaa
caagaggaagcgccgcactacgatgcgcgcgacgtcgcgttagagcgcgcttcgtcgttc
ggcgcgttgacggtattcggctctgcgacgccgtcccttcaggcgctctacctggctgag
cacgggcaggcccggatggtgacgttgccgattcgggtgaatcagcggccactgcctgcg
gtcgagatcatcgacatgcgagacgagttgcgcgcgggcaacaagtcgctttttagcgat
cgcctggccgacgagatcgagaagaccatcgcgctggggcagcaggtgattctcttcctc
aaccggcgcggttttgcctcttcgatgttgtgtcgcgcctgtggcgagggcatgcattgt
ccgcactgtgatatcagcctgactgtgcatcgggatgcgcatgggatgcggctggtgtgt
cactactgcggctacgaagagcaaagtcctgttgagtgcccggcgtgtggcgaacgcgcc
ttgcgctcgttcggtattgggacggagcagattgagcaaagtttgaaggagacgtggcca
cagcttcgcgccctgcgcatggacgtggatacgacgcgtaaaaaggggtcgctcaagcac
atcgtcgagcagtttgaacagcggcaggcggacgtgctcatcggcactcagatgatcgca
aagggcctcgactttccgcatgtgcggttggtcggcgtgatggccgccgatacgatgctc
gaggtgccagattaccgggcaaacgagcggacgtttcagttgctcacgcaggtggccggc
agagctggtcgcgccgaaacggatggagtgaccatcattcaaacctaccgcccggaccat
ttcgccgtcctggccgcagcgaggcacgactttccgtcgttttaccgcgaggagcgaatg
caacgcgaggtgttttcgtatcctccgttctgcgaaatggccgtgtttctggcgacgcat
tcggacgaggttctgtcgcggggagcggctgctcgcttcgagcgcgagctgcgccgggcg
tcgcttccggacgggaccgtggtccttccggcgtctccgagcggaatcaggcgcatagag
gataaatatcgctatcaagttgtgttaaagtatcagcgttgggaagacgtgcgagatatt
gtcgatcccgccttccgcctcgtcaaacagcggatgaacgagtacggtggcgcgtgtcgg
ctcgatgtcaatgcccagcgcattggctaa
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