Anoplopoma fimbria (sablefish): 129090029
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Entry
129090029 CDS
T09102
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2-like
KO
K08618
a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:
3.4.24.14
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129090029
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.14 procollagen N-endopeptidase
129090029
Peptidases and inhibitors [BR:
afb01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
129090029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Pep_M12B_propep
Reprolysin
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_2
Reprolysin_3
TSP1_spondin
ADAMTS_CR_3
Reprolysin_4
Peptidase_M10
PLAC
Peptidase_M7
Motif
Other DBs
NCBI-GeneID:
129090029
NCBI-ProteinID:
XP_054453474
LinkDB
All DBs
Position
4:complement(11780937..11886184)
Genome browser
AA seq
1781 aa
AA seq
DB search
MGLSPGFTVLIILPAFLLHTSGLYIASSVDSLQHVLGEYGLVRPISVDAEGRFLSHAVSA
SRMAGGQSRRRRKREVGVGNDEWEGPKEEPVALQERLYYNVTIFGREFHLRLRHNARLVA
PGAKMEWHDDSDSTRHSEPLHDECLYVGDIKDAPGASVAISNCDGLAGMIRMDQEEFFIE
PVERGDGVGEDEEEGGGGRTHVVYRSSAVKKAPISSPAAEYHTRGADIGGLMDLESLYRG
VEQSINNTRAGRMRRQSLDRAYNIEVLLGVDDSVVQFHGKEHVQKYLLTLMNIVNEIYHD
QSLGAKINVVLVRIIMLGYGKSMSLIELGNPSQSLENVCRWAFLQQKQDTGDAEYHDHAI
FLTRQEFGPTGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNR
CGDEVHMGSIMAPLVQAAFHRFHWSRCSMQELGRYLHSYDCLRDDPFDHNWPSLPQLPGL
HYSMNEQCRFDFGVGYTMCTALQKAGQSGTQYSSFDPCKQLWCSHPDNPFFCKTKKGPPI
DGTMCGNGKHCFKGRCMWLTPDIIKQDGTWGIWSEFGQCSRTCGGGVHFRTRECDNPRPA
NGGRTCMGATHQFQMCNTNECEDIYSDPREDQCHAWDPRFEIHSNKQQWLPYEHTDPNKR
CHLHCQSKETRDVVFMQRMVLDGTRCSYKDPHSVCVRGECEKVGCDGVVGSSKQEDKCGV
CGGDSSSCKTFKDTITRTAKKQGFLKVLEIPRGARHLLIHELKATSHTLAVKNVASGLFF
LNGENDYPETHSVIEKGVEWEYENDNDKETLQTTGPLRHGILIMMKLHGDEDVNLSYKYM
MNMDSDSAIQNNMLVEDSAYEWAPKRWSYCSKPCGGGRQYLRYGCRRKVDSKMVHKSFCN
KSNMKPRGDTRDCNQKPCPPPIWVTGEWQNCSKPCGKTGMHIRSVSCVQPSDDNTTRSIH
NKHCNDDRPETRRSCNRHPCPTQWRVGPWSQCSVSCGNGTQQRQALCHTRDNTIGLCLDS
KPDTIRVCRLDPCPKGSSDLNKNGNILIQWLSRPNPNFPKISSRQRCHGDRSVFCRMEAL
KRYCSLPEYQRMCCKSCSIVTITEPPPNSSSTSIPPSASPPTLSLDFNTIQSTKAAITTI
SASNINPWTTTHPPTSTTSVPHSTLSPLSATQMITTHPPAATSATVLPTTFSTATTSVIA
TSPSITDHPLPLPVPDIDVDTDPQSQSTTNSPTTSVITAIHLPATTSPTMTDPTESSTKT
DAPVKSKPKKIPPKKKPKKVIPPKVNPKKNTALKNTTRKDVPPKINAKKETSDISKKKSP
WNSNPPKNRTEKTTPKKTSPPNTTPKKTPPVKTTPKKTSPPNTTPKKTPHVKTTPKKTSP
PNTTPKKTPHVKTTPKKTSPPNTTPKKTPPVKTTPKKTSPPNTTPKKTPPVKTTLKKTPV
KKKPTLKKEASPKANPKKNIQPKTKVTKKKQTQTNPQKTPKLGPKNAKQFQAKSNPKKTT
LKTMPSYYTTTPTPYTSPEKLREYFSSTISSSTSVYATAAGIPLPESRINVTYINNKTAN
IDETPLWYHNTSTTTPSTFGDFITPTGTTHFEELNIPSGTIPYSDATITNSDDVTVTSGT
ILSDDDVTMSYSNGGVVSDTMVLDDSLTMVIPTINSEDMTDLASSPWLDLSEYIPVTIPV
PTTTLDPATASPPTTITLTTEKTTMATVTRSQLRPEENSENNSIDIIYNRIIGVDNDISL
NNLIPKRRVNLRERTKNKRIQELLEEKRNFLLRMKRGHAAR
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcgcctggatttactgtcctaattattctaccggcctttctgctgcacacc
agcggcctttacatcgccagtagcgttgactccctgcagcatgtcctgggggagtatgga
ctggtgaggccgatcagtgtggacgcagagggccgcttcctgtcacacgccgtctcggct
agccgcatggcaggagggcagtcccgtaggcgccggaagagggaggtaggagtaggcaat
gatgagtgggaaggaccaaaagaagagcctgtggccttacaggaaaggctttactacaac
gtcaccatcttcggccgggaattccacctgcgtctgcgccacaatgccaggctggtggcc
cccggagccaagatggagtggcatgatgacagcgacagcacccggcactctgagccactg
cacgatgaatgcttgtacgtgggggacatcaaagacgcaccaggagcctctgtggctatc
agcaactgtgacggcctggctggtatgatcaggatggaccaagaggagtttttcatcgag
ccggtggagaggggcgacggagtgggagaagacgaggaggagggaggaggaggaaggaca
catgtcgtctatcgctcctcagccgtaaagaaagcgcccatcagcagcccggcggcagag
taccacaccagaggtgctgatatcggcggtctgatggacctggagtcgctgtaccgcggc
gtggagcagagtatcaacaacacgcgagcggggcgaatgcgcagacagagcctggacagg
gcctacaacatcgaggtgctgctgggcgtcgacgactcggtggtccagtttcacgggaag
gagcatgtccaaaagtacctgctcacactcatgaacattgtgaatgagatctaccatgac
cagtctttgggagcaaagatcaatgtggtgctggtgaggattatcatgctgggctacggc
aagtccatgagtctgattgaactggggaacccgtctcagagtctggagaatgtctgtcgc
tgggccttcctgcagcagaagcaggacacaggggacgcggagtatcacgatcacgccatc
ttccttacacgccaggaatttggccccacgggaatgcagggttacgccccggtgacgggc
atgtgccatccggtaaggagctgcactttgaaccacgaggacggtttctcctctgccttt
gtggtggcacacgagaccggacatgtgctggggatggagcacgatggccaggggaaccgc
tgtggagacgaggtgcacatgggcagcatcatggctcccctggtgcaagctgccttccac
cgtttccactggtccagatgtagcatgcaagagctgggacgctaccttcattcctatgac
tgtctccgtgacgacccctttgaccacaactggccgtctctgcctcagcttcctggtttg
cactactccatgaatgaacagtgtcgctttgactttggggtgggctacacgatgtgcacc
gcgctacaaaaggcgggccagtcaggaacgcagtatagctcatttgacccatgcaagcag
ctgtggtgtagccacccagacaatcccttcttctgcaagaccaagaaaggaccgcccatt
gatggcaccatgtgtgggaatgggaagcactgctttaaaggtcgctgcatgtggttgaca
cctgacatcataaagcaagatggaacctggggtatatggagtgagtttggccagtgctcc
cgcacctgtggtggaggggtacactttcgcacacgcgagtgtgacaatcctaggccagcc
aatgggggccgtacctgcatgggggcgactcaccagttccagatgtgcaacaccaacgag
tgtgaggatatctacagtgacccgcgagaggaccaatgccacgcttgggacccccgcttt
gaaatccacagcaacaagcaacaatggctgccttatgagcatacagaccctaacaaacgt
tgccacctgcattgccaatccaaggagacacgagacgtggtcttcatgcagagaatggtc
ctggacggcacacgctgctcatacaaggacccccacagtgtgtgtgtgcgtggggagtgt
gagaaagtgggctgtgacggtgtggttggctcctcaaagcaggaggacaagtgtggagtg
tgtggaggagacagctccagctgcaaaaccttcaaagacaccatcacacgtactgccaag
aaacaaggtttcctcaaagttcttgaaatccccagaggagcgagacacttactgatccat
gagctgaaagcaacctcacacactttagctgtaaagaacgtggcatcaggactgttcttc
ttgaacggggaaaacgattacccagaaacccactccgtgatagaaaagggcgtggagtgg
gaatatgagaacgacaacgacaaggagacactccagaccactggtcctctcagacatgga
attctgatcatgatgaaattacatggagatgaggatgtgaatttgtcttataagtacatg
atgaacatggacagtgactccgccattcagaacaacatgctggtggaggacagtgcctat
gagtgggctccaaagagatggtcctactgctccaagccctgcggcggagggagacagtac
ctgcgatacggatgcagaagaaaagttgacagtaagatggtccacaagagcttctgcaac
aaatccaacatgaaacctagaggagacaccagagactgcaaccagaagccctgcccccca
cccatttgggtgacaggggagtggcagaactgcagcaaaccatgtggaaagacagggatg
cacatccgctcggtcagctgtgtccagccgtcagacgacaacaccacgcgctctatccac
aataaacactgcaacgatgaccggcccgagactcgcaggtcctgcaaccgacacccctgc
ccgacccagtggagggtcggaccgtggtcgcagtgctcagtgtcatgtggtaacggcacc
cagcagaggcaggctctgtgccacaccagggacaacaccatcggtctgtgtctggacagt
aagccagacaccatcagagtctgtcgcctggatccatgtcccaagggctcttccgacctc
aacaagaacggcaacatcctgatccagtggctgtctcgccccaaccccaacttcccaaag
atctcctcacgccagcgttgtcatggagaccgctctgttttctgtcgtatggaagcgttg
aagcgctactgctctctaccggagtaccagcgcatgtgctgcaagtcctgcagcattgtc
accattacagagcctccacccaactcctcatccacatccatcccgcccagtgcttctcca
cccactctcagcttagacttcaacaccatccaatccaccaaagctgccatcaccaccatt
tcagcttctaacatcaatccctggaccaccacccatcctcctacctctaccacttcggtt
cctcattccaccctttccccacttagtgctacacaaatgatcaccactcatcctccagca
gccaccagtgctactgtcctccccactacattttccacggcaacgacctcagttatcgca
acttctcccagtattactgatcatcccttacctctgcctgtcccagatatagacgtggac
acagacccacaatcacagagcacaacaaatagtccaacaacgtctgttataactgccata
caccttccagcaacaaccagtccaacgatgactgatccaacagaaagcagtacaaaaaca
gacgccccagtaaaatccaagcccaaaaagattccgccaaagaaaaaacccaaaaaggtg
attccaccaaaggtcaatccaaaaaagaatactgcactaaaaaatactacaagaaaagat
gttccaccaaagatcaatgccaaaaaggaaacaagtgatatttcaaaaaagaagtcccca
tggaacagcaatccccccaaaaatagaacagaaaagaccactccaaaaaagacttctcca
ccaaacactactcctaaaaagactccccctgtaaagaccactcccaaaaagacttctcca
ccaaacactactcctaaaaagactccccatgtaaagaccactcccaaaaagacttctcca
ccaaacactactcctaaaaagactccccatgtaaagaccactcccaaaaagacttctcca
ccaaacactactcctaaaaagactccccctgtaaagaccactcccaaaaagacttctcca
ccaaacactactcctaaaaagactccccctgtaaagaccactctcaaaaagactccagta
aaaaagaaacccacccttaaaaaggaggcttctccaaaggccaatcccaaaaagaacatt
cagccaaagacaaaagttacaaagaaaaaacaaacacagacaaatcctcaaaagacccca
aaactaggtcccaaaaatgccaaacaatttcaggccaagagtaacccaaaaaagacaaca
cttaaaacaatgccttcatattataccacaacccccactccatatacaagtccagaaaaa
ctgagggagtacttttcttccactatctcatccagcactagtgtatatgcaaccgctgca
ggcatacctttgcctgaatccaggatcaatgttacttacatcaataacaaaacagcaaat
atagatgaaactccactgtggtatcataatacttcaacaacaacacccagcacttttggt
gacttcataacaccgactggaaccactcattttgaagaactcaacattcctagtggaacc
ataccctatagtgatgccacaataaccaacagcgatgatgtcacagtaaccagcggaacc
attctcagtgacgatgacgtcacaatgtcctacagcaacgggggagtggttagtgacacc
atggtgctagatgacagcctcacaatggtgatcccaactatcaatagtgaagatatgacg
gacctcgcttcctcaccctggctagacctctctgagtatatccctgtgaccatccctgtt
cccacgacaaccttagaccctgccacagcctcacctcccaccaccattaccctgacaaca
gaaaaaacaacaatggcaaccgtcaccagatctcagctaagaccagaggagaacagtgag
aacaactccattgacatcatatacaacaggatcatcggcgtagacaatgacatctccctg
aacaatctgatcccaaagcgtcgggtcaacctcagagagagaaccaagaacaaacgcatt
caggagcttctggaggagaagaggaactttctcctccggatgaagagaggccatgcagca
cgatag
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integrated database retrieval system
