KEGG   Anoplopoma fimbria (sablefish): 129092795
Entry
129092795         CDS       T09102                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129092795 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:afb03041]
    129092795 (smndc1)
Spliceosome [BR:afb03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129092795 (smndc1)
 Complex B
    129092795 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    129092795 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4
Other DBs
NCBI-GeneID: 129092795
NCBI-ProteinID: XP_054456792
LinkDB
Position
6:10820954..10825535
AA seq 238 aa
MSDDLMKQLSSYKAQLQQVEVALSTDQENEDLLKLQKDLQEVIDLTKDLLTSQPTESSSS
TNGSDTVPLKHGWKVGDSCLAVWNQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLKAVEEGKRSNEDGSLKPKSKKEQIAEQREYKKKKAQKKVLRMKELEQEREEQKSKWQT
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttgatgaaacagctgagcagctacaaagcccagctgcagcaggtagag
gtagctctatctaccgaccaagagaatgaagacctccttaaactgcagaaagacttacag
gaagtcattgatttgacaaaagacctcctgacctcacagcccactgaaagttcttccagt
accaatggctcagacactgtacccctgaagcatggctggaaagttggggacagctgtttg
gctgtttggaatcaggacggacaggtgtatgaggctgagattgaggagatagaccgggag
aacggcactgcagccgtgaccttcgctggctacgggaatgccgaagtgattcctctgcag
aacctcaaagcagtagaggaggggaaacgttccaacgaggatgggagtctcaagccaaaa
tcaaagaaagagcagatagccgagcagagagagtacaagaagaaaaaagcccagaagaag
gtcctgaggatgaaggaactggagcaagagagggaggaacaaaagtcaaagtggcaaacg
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaaaaggagcatatttgcc
tctccagaaagcgtcaatgggaaggtgggagttggaacatgtggtattgcagacaagcca
atgacccagtaccatgacacgtcaaaatacaatgtcagacatctaatgccacaatga

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