Anoplopoma fimbria (sablefish): 129095494
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Entry
129095494 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 2-like
KO
K14946
RNA binding protein fox-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129095494
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129095494
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
129095494
NCBI-ProteinID:
XP_054459932
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All DBs
Position
9:complement(21131744..21165277)
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AA seq
457 aa
AA seq
DB search
MLMSTDVASIMLPVSRALMDRDRELDTMAGVHPNAGGAPAVVRGMKRGDPEPDGQAAAAL
VDSTGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPXNGLALDYGGSLYAAGAVQGPVEAGGAANGAVNVANSLSVQQSDGSSQIDG
SSVVGSGGVGGGGSIGDDTDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAASTAATFRGAHLRGRARPVYSAV
RAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcccgtgtcccgggctctcatggac
cgggacagagagctggacaccatggccggagtgcaccccaacgccggcggcgctcctgcg
gtcgtccggggcatgaagcgcggggacccggagcccgacggacaggcggcggccgctctg
gtggactctaccggggcggagtgcaagcgtccccggatcgacggctctggagggatcggt
gaggttgggcagaacaacgaccctttgacccttggttaccatggctacccgtctcatagt
cagggctctcaggatagtgctggcggtcaggagggactcgttcctccacctttctccgcg
ttcccgccgcctccacccccgcccccanngaacggcctggccctggattacgggggcagc
ctctacgcggcgggggccgtccagggccccgtggaagccggcggagcagcaaacggcgcc
gtcaacgtcgccaacagcctcagcgtccaacagtcagacgggtcctcccagattgacggc
tcttcagtggtcggctcaggaggagtcgggggtggagggagcattggggatgacacggac
gccaaggggacccccaaacggctccacgtgtccaacatccccttccgcttccgagacccc
gacctacggcagatgtttgggcaatatggcaaaatcctcgacgtggagatcattttcaac
gagagggggtccaagggcttcggttttgtaacattcgagacgagcgcggatgctgagcgg
gccagagagaagctccacggcacgctggtggaaggtcgtaaaatcgaggtgaataacgcc
acagctagagtgatgacgaacaagaagatgaccaccccgtactctaacggagagggcctc
gcaacgctgccatacgctgggtggaagttgagtcccatggttggagccatgtacagccct
gaactctatacagtaccggggttcccgtacccggcagcagcagcggcggctgcctccacc
gctgccacctttcgaggcgctcatctccgaggtcgagcccgacctgtctacagcgccgtg
agggccgctgtgccacaacccgccatccccacctacccgggtgtgatggcctatcaggat
ggcttttacggtgcagctgatctctatggcggctatgcagcgtatcgttacgcccagcca
actgcggtagcgactccagcggcagcggcggctgctgcggcagcttacagtgacagctat
ggacgagtttacacggcagacccctaccatgctgccctcgccccggctgcctacggtgtt
ggagccatggccacgctgtacagggggggctacagtagatttgccccttactag
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