Anoplopoma fimbria (sablefish): 129095522
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Entry
129095522 CDS
T09102
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129095522
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
Others
129095522
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
129095522
NCBI-ProteinID:
XP_054459973
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Position
9:17688064..17845735
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AA seq
1264 aa
AA seq
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MERELIFRPKWHSRLSFLFLMMLCFFQAAKAKAEITCRSCQPGNKWRPQELRLKFDTSES
TTGLKREVFGHGDGAVRSGAASAESRRLLCAAGSAECAPEMRAEPRRQRNTDSRQAGGES
GESDFSKMKVSNVRARSEQESSAGATRIRTRARRNSVDGDGDGDGGDDGGDGGDDGDKST
SARSAQSQDPGEQVRSAAGRRVARSETRWSGEERRAAGPRQEELKLNSSTFALTGDSSHN
QAMVHWSGHNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLY
VSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYILSLLFHPEQEDWILAYSHDQ
KLYSSVEFGRRWQVVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCT
DANKGKPFPGYIDPNSLVVQDEYVFVQVSAAGKPIYYVSAKRDVFTPMKLPKYTLPKDLH
VISTDENRVVAAVQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAG
IKGMFLANRKTDNQVKTHITYNRGRDWRLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSAN
PYTSGNIASRDTAPGIIVASGSIGSELTTNNVSVFVASDAGNTWRQIFDEEYALLYLDQG
GALVAIRHTPLPIRHLWLSFDEGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSH
RSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYF
VSMTSGPCDCTEADFECDYGYERRTNGKCTPAFWFHPSTMSRSCTKGLTFLNSTGYRKVV
SNNCTAGVSVEYTARRQQCPTQAPKGLHLVTSEGTLTATLGTNVTFLVFLEEGDGARTSI
TLDFGDGHALTYSNVSSIEDGIKHIYKAVGIYRVTATGENSLGSETVMLYLHVTCQLEYI
HLSAPFVAVRNKEVNLTAVLWPSQVGTVTYIWWIGNNTEPVITLEGSVACTFSREGISTV
TVQVSAGNTILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIKNSLIQAT
GVGEDQLLVTILPGLPTAAEFFLLPDKQLSEGKAEKSSAHLDQLSEVLLSALNQNLVQFT
LRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLGLAVFVIYKFKRKIPGLNVY
AQMQNEKEQEMMSPANPTEGTPGSQRDLVHSLEILDTEFNSRPIGCMKPHVHVKFSTELP
TYIV
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctcatatttcgcccaaagtggcacagtaggttgagttttttgtttttg
atgatgctctgcttctttcaagccgccaaagccaaagctgagataacttgcaggtcgtgc
cagcctgggaataagtggcgtccacaggaattacggctgaaattcgacacaagtgagtcc
acaactggattaaagagagaagtttttggacacggagacggggcagtgagatccggggct
gcaagtgctgaaagtcggcggctcctttgcgcagcaggttccgctgaatgcgctccagag
atgcgcgcggaaccaaggcgtcaacggaatacagacagccggcaggcaggaggcgagtct
ggcgagagcgacttctccaagatgaaagtttccaatgtcagagcgaggagcgagcaggag
agcagcgcgggggccacccgcatcagaacgcgcgccagaaggaacagcgttgatggtgat
ggtgatggtgatggtggtgatgatggtggtgatggtggtgatgatggggataaaagcaca
tccgccagatcagcccagagtcaagacccgggggagcaggtgcgctcggcggctggacgc
agagtggcccgctctgaaacgcgctggagcggagaggagcgcagagccgccggtccgagg
caggaggagctcaagctcaacagctccaccttcgccctgaccggggattcatctcacaac
caggctatggtgcactggtccgggcacaacagcagcgtaattttgatgctgaccaaactc
tttgacttcaacctcaacagcgtgactgagagttctttatggaggtcaactgactacggc
gcaacgtaccagaagctgaatgacaaagtaggagcaaagacaatactcagttatttgtac
gtgagtcccaacaacaagagaaagatcatgctgctgactgatccggaggtggagagcagt
ctcctgatcagctctgatgaaggggctacctaccagaagtaccggctgagcttctacatc
ctcagcctgctcttccaccccgagcaggaggactggattttggcctacagccacgaccaa
aagctctacagctcggtggagtttgggagaaggtggcaggtggtgcacgagagagtggcc
cccaaccggttctactggtcaaaaatgggtttggacaaagagccgggcttaattcacctg
gaaaccagcatctcggaaggacaagcgctgtatgtcacctgcaagctgcagaactgcacg
gatgccaacaagggcaaaccgttccccggctacattgaccccaattctctggtggtgcaa
gatgagtatgtgtttgtccaggtgtcagccgcagggaagccaatctactatgtttctgct
aaaagggatgtcttcacaccaatgaagctgcccaagtacacactgcccaaggacctgcat
gtgatcagtacggatgaaaaccgagtggttgcagcggtacaggagtggaaccagaacgaa
acctacaacctgtatgtgtcggacacgtcgggggtctactacaccctggctctggagaat
gtggtcagcagcatgggccccgagggcaacgtcatggtcgacctctacgaggtagcggga
ataaaggggatgttcctagcaaacagaaagacggataaccaagtgaagacgcacatcacc
tacaacagaggcagagactggaggttactgcaggcgccgagcaaagacctgcggggcaac
agcattcactgtgtgctaccatactgttcattacatctccatctccacgtgtctgcgaat
ccctacacatctggaaacatagccagcagggacacagcgccggggatcattgtagcctca
ggctctattggctcagagctgaccaccaacaatgtcagtgtgttcgtcgcctcggatgca
ggaaacacatggagacagatctttgacgaggagtatgcactgctgtatctcgaccaagga
ggagccttagtcgcaataagacacactccgcttcccatccgacacctgtggttgagcttt
gacgaaggacgtcagtggaacaagtacagcttcaccaacacgcctctgttcgtggacggg
gtgctgggagagccgggggaggaaacgctcatcatgacgatattcggccatgtcagtcat
cgctcggagtggcagctggtgaaaatagacttcaggtccatcttcaacaggaggtgtaca
gaggcggactatcagacgtggcacctacacaaccagggcgagccgtgcctcatgggagtg
aaaagaatctaccggaagctgaagcccacgtccaggtgcgttatgggaaagacgtacttt
gtatcgatgacgtcgggcccctgtgattgtacagaggctgactttgaatgtgactatggc
tacgagagacgaaccaatggcaagtgcacccccgccttttggttccatccatcaaccatg
tccaggagttgcaccaaagggttgactttccttaacagcacaggctacaggaaagtggtc
tctaataactgtacagctggagtcagtgtggagtatacagccaggaggcagcagtgtcct
acccaagcacccaaaggtctccacctggtcaccagtgagggaacgctgacagccacactg
ggcaccaacgtcaccttccttgtgtttctggaggagggcgacggggcgaggacaagcatc
acgctggacttcggagacggccacgctctgacctactccaatgtgagctctattgaggac
gggatcaaacacatctacaaagctgtgggaatctaccgggtgactgccaccggggagaac
agcctcggctcagagactgtcatgctctacctgcacgtaacatgtcagctggagtacatc
catctctcagctccctttgtggcggtgaggaataaggaagtgaacctcactgctgttctg
tggcccagccaagtgggaacggtcacctacatctggtggatcggaaataacacagagcca
gtaatcaccctagagggtagtgtggcgtgcacgttctcccgggaaggcatcagtacagtc
accgtgcaggtgtctgcagggaatactattctgcaggacagaaaaaccatcgctgtccac
gaatatttccgctctcatctgcttgccttttcatctaacctggatgaccacaaccctgat
gttgcagaatggaggctggatgtgagccgagtcatcaagaactctctgatccaggccaca
ggcgtaggagaggaccagcttctggtcaccatcctcccaggtttacccacagcagcagag
ttctttcttcttcctgacaaacagttatctgaggggaaagcagagaaaagttctgctcat
ttagatcagctctctgaggttctgctcagcgccttgaatcaaaaccttgtccagttcacg
ttgcggccaggggtccaagtcaccgtgtacgcagcacacttatcagcagcgcctctagtg
gacaccagcgagaaccacagtggctctgctatgctaatgctgttatcagtggtggttttg
ggtttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctat
gcgcagatgcagaacgaaaaagagcaagaaatgatgagtccagctaatccaacagagggc
acgcccggctcacagcgggacttggtgcattctttggagattctggacacagagtttaac
tcacggccgataggatgtatgaaacctcatgtacatgtgaaattctccacagaactcccc
acgtacatcgtctaa
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