KEGG   Anoplopoma fimbria (sablefish): 129097134
Entry
129097134         CDS       T09102                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
afb  Anoplopoma fimbria (sablefish)
SSDB
Motif
Pfam: PUF CFAP61_N
Other DBs
NCBI-GeneID: 129097134
NCBI-ProteinID: XP_054461845
LinkDB
Position
10:complement(4098538..4125025)
AA seq 1180 aa
MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKATFEGE
KLKELTEVEADVINDVINPNGLPVQNGLDVDVKEFCRPPGNMVVPGPEGDLLGGPGGVGA
DGMTPMGGGGGPKPQEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSQPTVGLFDYA
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAGPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQNQGQQNQQQVMRG
GGNQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGGRSGPVRLMAPASVIISPSAAQAVAAAAASQGGANGGLGGGANGPFRAMTSQQAQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQQASSSLGATLGAT
LGGFGTAGRTTPFPRSLLLESYQSVANSSGGSGSRRDSLTGNSELYKRNPSSLTPIGHGT
FYNGTLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAP
GAEAKYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRD
IAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEF
GSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVK
DQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPIL
EELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV
THASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRP
HISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq 3543 nt   +upstreamnt  +downstreamnt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaacagggcagacccctcaggccacaccccccagccagcagggtgtggcgggtgctgga
cgttcccaggatgatgccatggtagactacttcttccagcggcagcacggtgaacagcct
ggcaaacatcgctggccaactggagacaacatccatgacagccaggtgcgatccatggac
gagctgaaccacgactttcaggctctggctctggagggacgcgccatgggagagcagcta
ctaactggtaagaagttctgggagtcagatgactctgggaaggacggaccaaaagggatc
tttctggaccagtggagggacagtgcatggggtgcctcagatcactccgtgtctcagcca
atcatggtgtcccgtcggccagggcaaggtttccatggcggtggtgaagtaggggtgggc
tcggtgatgtcaccccggtccgagagtggagggctgggagttagcatggtggagtatgtc
ctgtcctcctcgccagccgacaaactggattcctgcctccgaaaaggaccttatggacag
agagatggagaggtggaggaggagaagagggagaagccgaaggcaacatttgaaggagag
aaactgaaagagttgacagaagtagaagctgatgtaatcaacgacgtcatcaaccccaat
ggactgcccgtgcagaacggccttgacgtcgacgtcaaagagttctgtcgtcccccaggc
aacatggtggtccccggtcctgagggtgacctgcttggtggtcccgggggtgtaggggct
gatggcatgacacccatgggaggtggtggaggccccaaaccccaggaagacttctctggc
gtggaacaaggtggcgtcactatggaccccatggagtcagtgatggagccgctgcaattt
gactacaactcccagatgcccatggactctcagcccactgttggcttatttgattacgcc
aaccagcagcagctgttccagagaaacaacgcccttgcagtgcagcagttaacagcagcc
cagcaacagcagtacgccttggcagcagcacagcagtctcacattggtctggctccagca
tttgtgcccaatccttacatcatcagtgctggtccaccagggacagacccctacgcagcc
ggactagcagcagcagcgacactcggtccggcagtgatgcctccccagtactacggtgtg
accccctggggggtctaccctgccaaccttttccagcagcaggccgctgcagccaacaac
tcggccaatcagcaggcacaaaaccagggccagcagaaccaacagcaggtgatgcgtggc
gggggcaaccaacgacctttgacccccagccaaggtcaacagggtcagcagaatgatcag
ctggttgcagcagcagcagtaaactcagcccttgcctttgggcaggggttggcagcagga
gtccccggctacccagtcctggcccctgcagcctactatgatcagacaggggccctcgtg
gtaaacactggaggtcggagtggccctgtccgcctcatggcccctgcctctgtcatcata
tctccttccgcagcacaagcagttgcagcagcagcagcctcacaaggtggtgccaacggt
ggtctgggcggcggggccaacggtccgtttcgtgccatgacgtcccagcaggcccagcag
cagggtggccccggtggcgctctgggaggaagctccttttacggatcctcctccctcagc
tcctcctcccagagttcctcacttttttcacaaggctccggccagccaggaccaggttct
gcctctttaggcttcagccagcaggcctcctcctccctcggtgccacactgggggccacg
ctcggaggcttcggcactgcaggtaggactacacctttcccacggagtctactgctggag
tcttatcagagtgtggccaactctagtggtggcagcgggtccaggcgggactccctgaca
ggcaacagtgagctgtacaaacgcaacccctccagcctcaccccgatcggccatggaacc
ttctataacggcaccctgggcttcagtccttcccctggccctgtgggcatgcccctaccc
aaccagggcccctcccattccctcacacccccgccttccctgtccaatcacagctcctcg
tccaacctcaatcttggaggcctgaccaatggcagtgggcgtttcatctctgcagctcca
ggagcagaggccaagtatcgcagcgctgccagctcaggctcctccctcttttcacccagc
agccagctgttcccatcatcacggctacgctacggcatgtcggacgtgatgccgtcaggc
cggagccgcctgcttgaggacttcaggaacaaccgctacccgaacctgcagctcagagac
attgcaggtcacatcatggagttcagccaggaccagcacggcagcaggtttatccagttg
aaattggagcgagccagttcagcggagcgccagctcgtcttcagtgagatactgcaggcg
gcctaccagctaatggtggacgtttttggaaattacgtcatccagaagttctttgagttt
ggcagcctggaccagaagctggctctggcagagaggatccgaggtcatgtgctgtctctg
gccctgcagatgtacggctgcagggtcattcagaaagctctggagttcatcccctctgat
cagcaggtcattagtgagatggtgcgggagctggacggccatgtgttgaagtgtgtgaag
gaccagaacggtaaccacgtggtgcagaagtgcatcgagtgtgtccagcctcacgcgctg
cacttcatcatagacgcctttaagggacaggtctttgccctctccactcacccttacggc
tgccgagtcattcagcgcattctcgaacactgccttcctgaacagacgctgcctatactg
gaggagctccatcaacacacagagcagctggtgcaggaccagtacggaaactatgtgatc
cagcacgttttggagcatggccgagctgaagataagagcaagatagtggctgaaattagg
ggcaatgtcttgggactcagccagcacaagtttgccagtaacgtggtggagaagtgtgtg
acccatgcgtcacgggcagaacgggcagtgttgatagatgaggtgtgcagcctgactgag
ggcccccacagtgccttatacaccatgatgaaggaccagtacgccaactacgtggtgcag
aagatgatcgacgtggccgagcccacccagcgcaagatcgtaatgcacaagatccggcct
cacatttccaccctgaggaagtacacgtatggaaaacacatcctggccaagctggagaag
tactacatgaagaacggggttgatctgggtcctctctgcggccctcccaatggcatcatg
taa

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