Anoplopoma fimbria (sablefish): 129097134
Help
Entry
129097134 CDS
T09102
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
afb
Anoplopoma fimbria (sablefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
129097134
NCBI-ProteinID:
XP_054461845
LinkDB
All DBs
Position
10:complement(4098538..4125025)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSSVCVLKRKAVLWQDSFSPHHRSTSPSMPVVLSSGGHAPPTGQTPQATPPSQQGVAGAG
RSQDDAMVDYFFQRQHGEQPGKHRWPTGDNIHDSQVRSMDELNHDFQALALEGRAMGEQL
LTGKKFWESDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVSRRPGQGFHGGGEVGVG
SVMSPRSESGGLGVSMVEYVLSSSPADKLDSCLRKGPYGQRDGEVEEEKREKPKATFEGE
KLKELTEVEADVINDVINPNGLPVQNGLDVDVKEFCRPPGNMVVPGPEGDLLGGPGGVGA
DGMTPMGGGGGPKPQEDFSGVEQGGVTMDPMESVMEPLQFDYNSQMPMDSQPTVGLFDYA
NQQQLFQRNNALAVQQLTAAQQQQYALAAAQQSHIGLAPAFVPNPYIISAGPPGTDPYAA
GLAAAATLGPAVMPPQYYGVTPWGVYPANLFQQQAAAANNSANQQAQNQGQQNQQQVMRG
GGNQRPLTPSQGQQGQQNDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALV
VNTGGRSGPVRLMAPASVIISPSAAQAVAAAAASQGGANGGLGGGANGPFRAMTSQQAQQ
QGGPGGALGGSSFYGSSSLSSSSQSSSLFSQGSGQPGPGSASLGFSQQASSSLGATLGAT
LGGFGTAGRTTPFPRSLLLESYQSVANSSGGSGSRRDSLTGNSELYKRNPSSLTPIGHGT
FYNGTLGFSPSPGPVGMPLPNQGPSHSLTPPPSLSNHSSSSNLNLGGLTNGSGRFISAAP
GAEAKYRSAASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLRD
IAGHIMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEF
GSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVK
DQNGNHVVQKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPIL
EELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCV
THASRAERAVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRP
HISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGIM
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgtgtgtgtgttgaagaggaaagcagtgctctggcaggattcattcagcccc
caccatagaagtacatctcccagcatgcccgtggtgctgagcagcggaggacatgcccct
ccaacagggcagacccctcaggccacaccccccagccagcagggtgtggcgggtgctgga
cgttcccaggatgatgccatggtagactacttcttccagcggcagcacggtgaacagcct
ggcaaacatcgctggccaactggagacaacatccatgacagccaggtgcgatccatggac
gagctgaaccacgactttcaggctctggctctggagggacgcgccatgggagagcagcta
ctaactggtaagaagttctgggagtcagatgactctgggaaggacggaccaaaagggatc
tttctggaccagtggagggacagtgcatggggtgcctcagatcactccgtgtctcagcca
atcatggtgtcccgtcggccagggcaaggtttccatggcggtggtgaagtaggggtgggc
tcggtgatgtcaccccggtccgagagtggagggctgggagttagcatggtggagtatgtc
ctgtcctcctcgccagccgacaaactggattcctgcctccgaaaaggaccttatggacag
agagatggagaggtggaggaggagaagagggagaagccgaaggcaacatttgaaggagag
aaactgaaagagttgacagaagtagaagctgatgtaatcaacgacgtcatcaaccccaat
ggactgcccgtgcagaacggccttgacgtcgacgtcaaagagttctgtcgtcccccaggc
aacatggtggtccccggtcctgagggtgacctgcttggtggtcccgggggtgtaggggct
gatggcatgacacccatgggaggtggtggaggccccaaaccccaggaagacttctctggc
gtggaacaaggtggcgtcactatggaccccatggagtcagtgatggagccgctgcaattt
gactacaactcccagatgcccatggactctcagcccactgttggcttatttgattacgcc
aaccagcagcagctgttccagagaaacaacgcccttgcagtgcagcagttaacagcagcc
cagcaacagcagtacgccttggcagcagcacagcagtctcacattggtctggctccagca
tttgtgcccaatccttacatcatcagtgctggtccaccagggacagacccctacgcagcc
ggactagcagcagcagcgacactcggtccggcagtgatgcctccccagtactacggtgtg
accccctggggggtctaccctgccaaccttttccagcagcaggccgctgcagccaacaac
tcggccaatcagcaggcacaaaaccagggccagcagaaccaacagcaggtgatgcgtggc
gggggcaaccaacgacctttgacccccagccaaggtcaacagggtcagcagaatgatcag
ctggttgcagcagcagcagtaaactcagcccttgcctttgggcaggggttggcagcagga
gtccccggctacccagtcctggcccctgcagcctactatgatcagacaggggccctcgtg
gtaaacactggaggtcggagtggccctgtccgcctcatggcccctgcctctgtcatcata
tctccttccgcagcacaagcagttgcagcagcagcagcctcacaaggtggtgccaacggt
ggtctgggcggcggggccaacggtccgtttcgtgccatgacgtcccagcaggcccagcag
cagggtggccccggtggcgctctgggaggaagctccttttacggatcctcctccctcagc
tcctcctcccagagttcctcacttttttcacaaggctccggccagccaggaccaggttct
gcctctttaggcttcagccagcaggcctcctcctccctcggtgccacactgggggccacg
ctcggaggcttcggcactgcaggtaggactacacctttcccacggagtctactgctggag
tcttatcagagtgtggccaactctagtggtggcagcgggtccaggcgggactccctgaca
ggcaacagtgagctgtacaaacgcaacccctccagcctcaccccgatcggccatggaacc
ttctataacggcaccctgggcttcagtccttcccctggccctgtgggcatgcccctaccc
aaccagggcccctcccattccctcacacccccgccttccctgtccaatcacagctcctcg
tccaacctcaatcttggaggcctgaccaatggcagtgggcgtttcatctctgcagctcca
ggagcagaggccaagtatcgcagcgctgccagctcaggctcctccctcttttcacccagc
agccagctgttcccatcatcacggctacgctacggcatgtcggacgtgatgccgtcaggc
cggagccgcctgcttgaggacttcaggaacaaccgctacccgaacctgcagctcagagac
attgcaggtcacatcatggagttcagccaggaccagcacggcagcaggtttatccagttg
aaattggagcgagccagttcagcggagcgccagctcgtcttcagtgagatactgcaggcg
gcctaccagctaatggtggacgtttttggaaattacgtcatccagaagttctttgagttt
ggcagcctggaccagaagctggctctggcagagaggatccgaggtcatgtgctgtctctg
gccctgcagatgtacggctgcagggtcattcagaaagctctggagttcatcccctctgat
cagcaggtcattagtgagatggtgcgggagctggacggccatgtgttgaagtgtgtgaag
gaccagaacggtaaccacgtggtgcagaagtgcatcgagtgtgtccagcctcacgcgctg
cacttcatcatagacgcctttaagggacaggtctttgccctctccactcacccttacggc
tgccgagtcattcagcgcattctcgaacactgccttcctgaacagacgctgcctatactg
gaggagctccatcaacacacagagcagctggtgcaggaccagtacggaaactatgtgatc
cagcacgttttggagcatggccgagctgaagataagagcaagatagtggctgaaattagg
ggcaatgtcttgggactcagccagcacaagtttgccagtaacgtggtggagaagtgtgtg
acccatgcgtcacgggcagaacgggcagtgttgatagatgaggtgtgcagcctgactgag
ggcccccacagtgccttatacaccatgatgaaggaccagtacgccaactacgtggtgcag
aagatgatcgacgtggccgagcccacccagcgcaagatcgtaatgcacaagatccggcct
cacatttccaccctgaggaagtacacgtatggaaaacacatcctggccaagctggagaag
tactacatgaagaacggggttgatctgggtcctctctgcggccctcccaatggcatcatg
taa
DBGET
integrated database retrieval system