Anoplopoma fimbria (sablefish): 129097894
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Entry
129097894 CDS
T09102
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129097894 (rbfox1)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129097894 (rbfox1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
129097894
NCBI-ProteinID:
XP_054462763
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All DBs
Position
11:complement(18292189..18401258)
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AA seq
407 aa
AA seq
DB search
MQHPGGTCVALPNVDACPQLSCAALTFMYLQQGNQDTPAPPDPSMAQAYPSAQFAPPPQN
NITAEFTASHPHPHPHPHSHPHQHQATPQDYTGVQEHPLNMYQSSQSHNEQIGSDSGSQT
VTGTATQTDDAAQTDSHPPTQTVPESTDSKTQPKRLHVSNIPFRFRDPDLRQMFGQFGKI
LDVEIIFNERGSKGFGFVTFEHSVDADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVN
PYANGWKLNPVVSAVYSPEFYAVPGFPYPTASAAAAYRGAHLRGRGRTVYNTFRAAAPPP
HIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTAATAAAYSDSYGRVYAADPYNHTLTPAA
TYSVGAMNAFTPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctggaggaacatgcgtggcgttacccaacgtggacgcctgtcctcagctg
tcttgcgccgccctcaccttcatgtatttacagcagggtaaccaggacacaccggcaccc
ccagacccgtccatggcccaggcctacccatcagcccagtttgccccccctccgcagaac
aacattacagctgagtttacagcttcacaccctcatccacatccacacccccactcacat
ccacaccagcaccaagcaaccccacaggactacaccggtgtccaggagcatccactcaac
atgtaccagtcctcacagagccacaatgagcagatcgggtcagactccggcagtcagacc
gtcaccggcacagccacacagacagatgatgccgcccagacggacagtcatccaccaaca
cagacggtacccgaaagcacagacagcaagacccaacccaagagacttcatgtctccaac
atccccttcaggtttagagacccagacctcaggcaaatgtttggccaatttggcaaaatc
ttggatgtggaaatcatcttcaacgagcgcggttctaagggttttgggttcgtaacgttc
gagcatagcgtggacgccgacagggccagagagaaattacacggcaccgtggtagaaggc
cgtaaaatagaggtcaacaatgcaacagcccgagtaatgacaaataagaagactgtcaac
ccatatgcaaatggctggaagttaaatccagtggtcagcgctgtctacagcccagaattc
tatgcagtaccaggttttccctacccaacagccagtgcagcagcagcatacagaggagcc
cacctaagaggtcgaggacggaccgtgtacaacacattcagggcggcggccccgcctccg
cacattccagcgtacggaggtgttgtttaccaggatggattttatggtgcagatatttat
ggtggttacgctgcctacagatatgcccagcctactgctgccacagctgctgcatacagt
gacagttacggacgagtatatgctgccgacccctacaaccacacactcactccagcagcc
acatacagcgttggtgccatgaacgcgttcaccccgctgacagatgcgaaaactcggagc
catgcggacgacgtggggctagtgctgtcctctctccaggctagtatataccgaggaggc
tacagccgcttcgcaccctattag
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