Anoplopoma fimbria (sablefish): 129101109
Help
Entry
129101109 CDS
T09102
Symbol
susd1
Name
(RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1
KO
K23819
sushi domain-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129101109 (susd1)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Other domain-containing proteins
Sushi domain-containing proteins
129101109 (susd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
EGF_CA
EGF_3
cEGF
EGF_MSP1_1
HRM
EGF
Motif
Other DBs
NCBI-GeneID:
129101109
NCBI-ProteinID:
XP_054466736
LinkDB
All DBs
Position
13:20561526..20572538
Genome browser
AA seq
1082 aa
AA seq
DB search
MDKRNGAMIVVFLLFVIAEVPAEGHILDVCATCHINATCDDKFDGHGKVCNCMYGFVGNG
RTFCLDKDECQIGSNKICGQHTTCHNTYGSYYCKCLSGYSPSNSMAIFIPNDGTHCRDVD
ECRATGLCGEGAQCRNLEGSFDCSCQLGYKVHNGAEPFQPDRDGASCKLVDCGQPPSVED
TVLLTVTGTTYRSVAVFVCDEGFVWRSGDNSSVCGADGLWKKPNMVCEVVDCGQPPSVED
TVLLTVTGTTYRSVAVFVCDEGFVWRSGDNSSVCGADGLWKGPNMVCEVVDCGQPPSVED
TVPLTVTGTTYRSVAVFVCDEGFVWRNGDNSSVCGADGLWKGPNMVCEVVDCGQPPSVED
TVPLTVTGTTYRSVAVFVCDEGFVWRSGDNSSVCGADGLWKGPNMVCEEVDCGSPPALPH
SHMLWNKSSRIGTEVVYQCNSGYHNVGKGNVSICTSAGQWERPSTLCQEAMCGSPPIIES
TDQVWDGHSTPGSTVLYVCKEGFYNKGGLNLSMCNENGQWTPPTLLCQDILCGDPPILPH
TGQVWNGGFTPGSKVTYYCKIGFYHSEGNNMSLCSINGYWTNPNISCKEVDCGVPPPIPH
SIMLWDKISTLGSQVVYQCNPGYRSVGNVSVCAASGDWDAVSLLCQEIICQEPVFKPHAK
MLWDGTTHVGSVVYYQCEEGYYTRSLRNYSVCGENGLWEDIDLWCEEISCGPPLTLPHTN
LRWDRTSRPGSVALYECMDGFYQMSGNNISTCLLSGQWGKVSVKCNAECGPVPFLAKSEV
FWHNRSVVIHRCVDGYHSWRGSNVSVCGSNGVWQRATLRCIAIKPPVNHLSVLNEKCLHW
RAEKYEEDTEVYKVTYIGSRDYERSFHDRGKRSLNSKAEQLELCLNLLPVTNYSISITAL
SSRFTTTITTNTSLTVPPLPVVYYREFETPEPTLMLRRSPNTLDPISLYQVFVHPLDGIM
MFDCSSPTSSDISSKTKSWTEYITAQIDVKHVGTEMNFTVGDGLYYGGFFNAPLENGRNY
YIILRAVSQWKLALKGSCVLWAKVKGTSYVLMVSSLSAAALIGLVAMVTLGAYFFTWFFK
RT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagaaacggagcaatgatcgtggtttttctgctctttgtcattgcagaagtt
ccagcagaaggtcacattctggatgtgtgtgccacctgccacattaacgccacatgtgac
gacaagtttgacggccatggcaaagtttgtaactgcatgtacggctttgttggaaatggg
agaaccttctgtctagataaagatgagtgtcagattggtagcaataagatctgtgggcag
cacactacctgccacaacacatatggcagctactactgcaaatgcctgtctggctacagc
ccttctaacagcatggccatcttcatcccgaatgatgggacccactgccgggacgtcgac
gagtgcagggccacaggcctgtgtggagagggagctcaatgcaggaatcttgagggcagt
tttgactgcagctgtcagctgggatataaagtccacaacggagcggagcccttccaacct
gacagagacggagcttcctgcaaactggttgactgtggccagcctccctcggtggaggac
acagtgcttctgacggtcacaggcaccacatacaggagtgtggccgtgtttgtctgtgat
gaaggctttgtgtggaggagtggagacaacagctctgtgtgtggagctgatggactgtgg
aaaaaacccaacatggtctgtgaagtggttgactgtggccagcctccctcggtggaggac
acagtgcttctgacggtcacaggcaccacatacaggagtgtggccgtgtttgtctgtgat
gaaggctttgtgtggaggagtggagacaacagctctgtgtgtggagctgatggactgtgg
aaaggacccaacatggtctgtgaagtggttgactgtggccagcctccctcggtggaggac
acagtgcctctgacggtcacaggcaccacatacaggagtgtggccgtgtttgtctgtgat
gaaggctttgtgtggaggaatggagacaacagctctgtgtgtggagctgatggactgtgg
aaaggacccaacatggtctgtgaagtggttgactgtggccagcctccctcggtggaggac
acagtgcctctgacggtcacaggcaccacatacaggagtgtggccgtgtttgtctgtgat
gaaggctttgtgtggaggagtggagacaacagctctgtgtgtggagctgatggactgtgg
aaaggacccaacatggtctgtgaagaggtcgactgtggctctccccctgccctccctcac
tctcatatgctgtggaataagagttcaaggattggcacagaggtggtttatcagtgtaac
tctggatatcataatgttggaaagggaaatgtgtccatctgtacttctgctggacagtgg
gagagaccgtctacgctctgtcaagaggccatgtgtggaagtcctccaataattgaatcc
actgatcaggtgtgggacggtcattcaacccctggcagcactgtgctctatgtttgtaaa
gagggcttttataacaaaggaggacttaatttatcgatgtgtaatgaaaacggtcagtgg
acccccccaaccctgttgtgtcaagacatattatgtggggatccccctatactgcctcac
actgggcaagtgtggaatggcggcttcacccctggaagcaaagtgacttactactgtaaa
ataggattttatcacagtgaaggaaataacatgtcattgtgctccattaatggttactgg
acaaatccaaacatctcatgcaaagaagttgactgtggtgtgccaccacccatcccccat
tcaatcatgctgtgggataaaatctccactttgggctctcaggttgtttatcagtgtaac
cctggatatcgcagtgttggaaatgtgtcagtttgtgctgccagtggagattgggatgca
gtctctctgctctgtcaagaaatcatttgtcaagagcctgtttttaaaccgcatgctaaa
atgctatgggatggcacaacacacgttggcagtgtggtgtattaccaatgtgaggaagga
tattacaccaggagcctgagaaactactcagtatgcggagagaatggactgtgggaggat
attgatctatggtgtgaagaaataagctgtggccccccactaaccctcccccatactaac
ctccggtgggatcgcaccagtagaccgggcagtgtggcgctctatgagtgcatggatgga
ttttaccagatgagtggaaacaatatttcaacgtgtttactatcaggacagtgggggaag
gtatctgtaaagtgcaacgctgaatgtggcccggttcccttccttgccaaatcagaggtg
ttctggcataacaggagtgttgtgatccaccgctgtgtggatggataccacagctggagg
ggcagcaatgtgtctgtgtgtggcagtaatggggtttggcagagagctacactgagatgc
atagcaataaagccacctgtcaatcatctatctgtcctcaatgaaaagtgtcttcactgg
agagcagagaagtatgaggaggatacagaagtatacaaggtgacatacataggatccaga
gactacgagaggtcctttcatgatagaggaaagcggtctctgaactctaaggcagaacag
cttgaactctgtctgaacctgcttccagtcacaaactacagcatctccatcactgcactg
tcttccagattcactaccaccatcaccactaacaccagtttaacagtgcccccattgcca
gttgtctactacagagaatttgagactcctgaaccaactttgatgctacgcagatcaccc
aacacattggacccaataagtttgtaccaggtgtttgtgcatcctttagatgggatcatg
atgttcgactgttcctctccaacgagctcagacatctcaagcaaaacaaagtcctggaca
gagtacatcactgcccagattgatgtcaaacatgttgggacagagatgaacttcactgta
ggagatggactctactacggaggcttctttaacgcaccactggagaacggcaggaactat
tatatcatcttacgagcagtcagtcagtggaaattggctttaaaaggttcctgtgtcctg
tgggctaaagtgaaaggtacatcctatgttctgatggtttcatctctgtctgctgctgca
ttaataggactggttgccatggtcactttgggtgcatacttcttcacctggtttttcaag
aggacatga
DBGET
integrated database retrieval system
