Anoplopoma fimbria (sablefish): 129102064
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Entry
129102064 CDS
T09102
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129102064 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129102064 (trim32)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129102064 (trim32)
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129102064 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-RING_4
Baculo_IE-1
Sina_RING
Haem_bd
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
129102064
NCBI-ProteinID:
XP_054467981
LinkDB
All DBs
Position
14:complement(14231925..14236331)
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AA seq
685 aa
AA seq
DB search
MEAASSPLDPELMREVLECPICMETYNQDQMRPKLLQCGHTVCRQCLEKLLANTINGVRC
PFCSKVSRMSSISQLADNLTVLKILDCTTSCSAAAAALMCKSCCNRLPRQYCHDCTTVLC
ELCKGEGHLHQGHSVQPIRVAAEQRRKELGGKLASLRDVMGEIQKKKTAIESISKSLRLK
SQAVQQDYTSAELRIQEQLSRSRRTFTASMAEVEKLNGRVLEEQTYLLNIAEVKVVSRCD
YLTMLVRQSDTALLKDDGEGSDDEELDWRSSLPTMFQLQEPGLVRTAHLKPVEVGQVTTN
AYSVNTEDEQSGLETELEGDVESVAGAMGAYGGVRRAPVDLYRDIDMVAATEEAVCGSPC
SFKSKSLDAGGGSPGGAGASAGPPVCQFVKKMGCKGTLPGMFNLPVSVCVTPQGEVLVAD
RGNYRIQIFNRKGFQREIRRSASSIDNFVLSFLGADLPNLIPLSIAVTPQGLIGVTDNYD
NSVKVYTMDGQCVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVERNVGVVSYNR
LCSAVRPKFVTCDAAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVDKDGQLGKQLSHFF
SESEDFRCITGMCVDANGDLLVTDSGRKEILQFPKEGGFKILIQEGLTCPVGVATTQKGQ
LLVLDCWDHCVKVYTYIQRRHSSTS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcatcttccccgctggaccccgagttaatgagggaggttcttgaatgccct
atatgcatggagacctacaaccaggatcaaatgagacccaaactcctgcagtgtggtcac
acagtgtgccgtcagtgtctagagaagctgttggccaatactataaacggtgtgcgatgc
cctttctgtagcaaggtgtcccgtatgagcagtatctcccagctggccgataatctcacc
gtgctcaagatcctcgattgtactacatcctgcagtgccgctgctgccgcccttatgtgc
aagtcctgctgcaaccgcctaccacgacagtactgtcatgattgcaccacagtcctctgt
gagctttgtaaaggggaagggcaccttcaccaaggccattcagtccagccgattagggtg
gccgctgaacagcgtcgtaaagaactgggtggtaaactggcttctctgcgtgatgtcatg
ggcgaaattcagaagaaaaagacagctattgaaagcatttcaaagtctttgagacttaag
tcccaggcagtgcagcaggactatacttcagccgagctacgtattcaagagcaactcagc
aggtctcgaaggacattcacagcttccatggcagaagtcgaaaagctaaatgggcgggtc
ctggaagagcaaacatatcttcttaacattgcagaggtaaaagtggtgtcgcgttgtgat
tatctgacaatgctggtgaggcagagcgataccgctttgctaaaggatgatggcgaaggc
agtgatgatgaagagctggattggagaagtagcttgcccacaatgtttcagctgcaggag
ccagggctggtcagaacagcgcacttgaaacctgtagaagtgggccaagtgaccacaaat
gcttattctgtcaatacagaggatgagcagagtgggttggagaccgaacttgagggtgac
gtagagagtgtagctggagcaatgggggcttatggtggtgttaggcgggctccagtggat
ctttaccgagacattgacatggttgcagctacagaggaggcggtctgtggttcaccatgc
agctttaagtcaaagtccctggatgcaggtgggggatcgcctggaggagctggtgcaagt
gcagggcctccagtctgccagtttgtgaagaaaatgggctgcaagggaacgctacctggc
atgttcaatttaccagtcagcgtctgtgtaacgccacaaggtgaggtcctggtggctgac
cgtggcaactaccgcatccagatctttaatcgcaaaggtttccagcgtgaaattcgccgc
agtgctagtagcattgacaactttgtcctgagcttccttggggctgatctgcctaacctc
atccccttatccattgctgtcactcctcaaggactgattggggtcactgacaactacgat
aactcagttaaagtctacactatggatggacaatgtgtggcttgccataaaaaccagcta
atcaaaccctggggcattaccgctatgccatcaggtcagtttgtggtgtcagatgtggaa
ggtggcaagctgtggtgcctagcagtggaacgcaatgtaggtgtggtcagctacaaccga
ttgtgctctgctgtgaggccaaagtttgtgacatgtgatgcagctggaacggtctatttc
acccagggcctagccctgaactttgagaaacgtcacaatgagccccatctggaaggtggc
ttttccatcggctcagttgataaggatggccagctaggcaagcagctcagccatttcttc
tcggagtcagaggacttccgctgtatcactggaatgtgtgtggatgccaatggggatttg
ctggtaacggacagtggcaggaaggaaatccttcagtttcccaaagagggtggattcaaa
attctcattcaggaagggctgacgtgccctgtaggagtggccaccacccagaaaggacaa
ctgctagtgctggattgttgggaccactgtgtgaaagtctacacatacattcagaggagg
cactcctccacttcctag
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