Anoplopoma fimbria (sablefish): 129102770
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Entry
129102770 CDS
T09102
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129102770
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129102770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Prok-RING_4
DUF5713
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
129102770
NCBI-ProteinID:
XP_054469014
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All DBs
Position
14:complement(8431294..8432979)
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AA seq
517 aa
AA seq
DB search
MAQQGIQLDQERLCCSICLDLLKDPVTIPCGHNYCMKCIKSHWDQEDQKEIYSCPQCRQT
FRPRPALVKNTMLADLVEELKKTGLQSAPADHCYAGPEDVACDFCTGRKLKALKSCLQCV
VSYCEQHLQPHYGSPAFEKHKLVDPFNKLQENICTHHNEVMKIFCRTDHHCICYLCSMDK
HRGHDTVSVAAERTERQKELGTSQQKIQQRIQNREKDEKMLQQEVEAINHSANKAVNESE
KIFTDLIRVIEKRSSDVKQQIISQQKTEVSRVKELQKELEEEIFELRRKDAELEQLSHTE
DHTQFILKYPLLSRLSESTDIPRINIAELKTRGEFLKYSQRLTLDPNTANTRLLISEGNT
KATNMSKKQLYSSHPDRFLNRSQVLSQESLTGRHYWEVEWSGLGVHVAVAYKDVSRRGAE
SEFGCNDQSWTLDCSDEGYEFSHNGVATSISGPESSRVGVYLDHRAGILCFYSISENMTF
LHRVQTTFTQPLYAGLRAYSLFNFRSSAEFCEPKDKS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggaattcagctggaccaagaaaggctttgctgttcgatctgtctggat
ctactgaaggatccagtgactattccctgtggacacaactactgtatgaaatgtattaaa
agccactgggatcaagaggatcagaaggaaatctacagctgtcctcagtgtagacaaacc
tttaggccgaggcctgccttggtgaaaaacaccatgttagcagatttagtggaggaactg
aagaagacaggactccaatctgctccagctgatcactgctatgctggacctgaagatgtg
gcttgtgatttctgcactgggagaaaactgaaagctctcaagtcctgtctgcagtgtgtg
gtctcctactgtgagcagcacctccagcctcactatggatccccagcctttgagaagcac
aagctcgtcgaccccttcaacaagcttcaggagaacatctgtactcatcacaatgaggtg
atgaagatattttgccgcactgatcatcattgtatctgttatttgtgctccatggataaa
catagaggccacgacacagtttcagttgcagcagaaaggactgagaggcagaaagagctt
gggacgagtcaacaaaaaatccagcagagaatccagaacagagagaaagatgagaagatg
cttcagcaggaagtggaggctatcaatcactctgctaacaaagctgtaaacgaaagtgag
aagatcttcacagatctgatccgtgtcattgagaaaagaagctctgatgtgaagcagcag
atcatatctcagcagaaaactgaagtgagtagggtaaaggagcttcagaaggagctagag
gaggagatctttgaactaagaaggaaagacgctgagctggagcagctctcacacacagag
gaccacacccaatttatcctcaagtacccccttctgtcacggcttagtgaatctacagac
atacccagaataaatatcgcagagctaaagaccagaggtgaattcttaaaatattcacaa
agacttacactggatccaaataccgctaacacacggctgttaatatctgaggggaacacg
aaagcaacaaacatgagtaaaaaacagttgtattctagtcacccagatcgatttcttaac
aggtctcaggtcctgagtcaagagagtctgactggacgtcattactgggaggtggagtgg
agtgggttaggagttcatgtagctgttgcatacaaggatgttagcagaagaggagcagaa
agtgaatttggatgtaatgaccagtcttggactctagattgttcagatgagggttatgaa
ttcagtcataacggagtggctacttccatctcaggtcctgagtcctccagagttggagtg
taccttgatcacagggcaggtattctgtgtttctacagcatctctgaaaacatgactttc
ctccacagagtccagaccacattcactcagcctctctatgctggactcagagcttatagt
ctttttaattttagatcatctgctgagttttgtgagccaaaagacaaaagctag
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