Anoplopoma fimbria (sablefish): 129102836
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Entry
129102836 CDS
T09102
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129102836
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129102836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
PRY
CC149
Golgin_A5
DUF4200
FapA
ISG65-75
ALS2CR8
Motif
Other DBs
NCBI-GeneID:
129102836
NCBI-ProteinID:
XP_054469085
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All DBs
Position
14:complement(11810194..11811949)
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AA seq
389 aa
AA seq
DB search
MKIFCRTDQQCICYLCSIDEHKGHDTVSAAAEMAERQKELGTSRQMIQQRIQNREKDVKV
LQKELEAINRSADKAVTDSEKIFTDAKLQIRSRQKSEVSHVNRLQEKLQQEIADLNGKDA
ELERLSRAADHTQFLHSYASLSRLGEATDSPSVKIRSQRYTEDVTAAVSEVRDKLQDILS
EEWSTISLAGTEEVLVPQAEPETRTDFLKYSCQITLDQNTAHKYMSLEYGQKAKHIYVQN
FYYGHPDSFTDWCQILCRESLTGRCYWEVECNGSAIFVAVAYKKMSRVGRESAFGNNDKS
WALQCFHDGYEFSHNNMRTSISGPHSPTVGVYLDHSAGILSFYSVSETMTLLHRVQTTFT
QPLCPGLGIHSRGASAKICGASDTEEETA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattctgccgcactgatcaacaatgtatctgttatctttgctccattgatgaa
cataaaggccacgacacagtctcagccgcagcagaaatggccgagaggcagaaagagctt
gggacgagtcgacaaatgatccagcagagaatccagaacagagagaaagatgtgaaggtg
cttcagaaggagctggaggctatcaaccgctccgctgataaagctgtgactgacagcgag
aagatcttcacggacgcaaagctgcagatcagatctcgtcagaaatcagaagtgagtcac
gtcaacaggcttcaggagaagctgcagcaggagatagccgatctgaacgggaaagacgct
gagctggagcggctctcacgcgcagcagatcacacccagtttctgcacagctacgcctca
ctgtcgcgtctcggcgaggctacagattcgcccagcgtcaagatccgttcccaaaggtac
accgaggatgtgactgctgctgtgtcggaggtcagagataaactacaggacattctcagc
gaggaatggagcacgatctcattggcagggactgaagaggttttagtgccacaagcagag
cccgagactagaactgacttcctcaaatactcgtgtcaaatcacactggatcaaaacaca
gcacacaaatatatgtctttggaatatggccaaaaggcaaagcatatatatgttcaaaat
ttttattatggtcacccagacagttttactgactggtgtcagattttgtgtagagaaagt
ctgactggacgttgttactgggaggtggagtgcaatgggagtgccatttttgttgcagtc
gcatacaagaaaatgagcagagtaggaagagaaagtgcatttggaaacaatgacaagtct
tgggcactacaatgtttccacgacggttatgaatttagccataacaacatgagaacttcc
atctcaggccctcactcccccacagtaggagtgtacctggaccacagtgcaggtattctc
tccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcact
cagcctctctgtcctggacttgggattcatagccgtggagcctctgctaaaatctgtgga
gcctcagacacagaagaggaaacagcatag
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