Anoplopoma fimbria (sablefish): 129108064
Help
Entry
129108064 CDS
T09102
Symbol
hexa
Name
(RefSeq) beta-hexosaminidase subunit alpha
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00511
Other glycan degradation
afb00513
Various types of N-glycan biosynthesis
afb00520
Amino sugar and nucleotide sugar metabolism
afb00531
Glycosaminoglycan degradation
afb00600
Sphingolipid metabolism
afb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
afb00604
Glycosphingolipid biosynthesis - ganglio series
afb01100
Metabolic pathways
afb04142
Lysosome
Module
afb_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
129108064 (hexa)
09103 Lipid metabolism
00600 Sphingolipid metabolism
129108064 (hexa)
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
129108064 (hexa)
00531 Glycosaminoglycan degradation
129108064 (hexa)
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
129108064 (hexa)
00604 Glycosphingolipid biosynthesis - ganglio series
129108064 (hexa)
00511 Other glycan degradation
129108064 (hexa)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129108064 (hexa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
afb03110
]
129108064 (hexa)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
129108064 (hexa)
Chaperones and folding catalysts [BR:
afb03110
]
Intramolecular chaperones
Others
129108064 (hexa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
129108064
NCBI-ProteinID:
XP_054475686
LinkDB
All DBs
Position
19:1077573..1084227
Genome browser
AA seq
535 aa
AA seq
DB search
MAVSMVSFGGYTRPHVYLLLLILLPLGRHTVDGVWPLPQTFTSSVERYPLNPQTFYFGYG
RQSAAQPGCSVLDAAFKRYFYLIFPDYIGNGVLRFSEVKPFNIEISVDHEDCEGYPNEDS
SERYNLSVSAGQASLSAETVWGAVRGLETFSQLVYQDDFGSYFVNKTEIDDFPRFAFRGI
LLDTSRHYLPVHAILKTLDAMAYSKFNVFHWHIVDDPSFPYQSRTFPDLSSKGAFHPMTH
IYTQSDVKRVISHARLWGIRVLPEFDTPGHTQSWGKGQPDLLTPCFKGSTPSGTFGPVNP
MLPSTYQFMEKLFKEVSSVFPDSYIHIGGDEVDFSCWQSNPDIRAFMKKMGFGVDFTKLE
AFYMENIVNITAALNKTTIVWQDVFDYHERIPKDTVLHIWKGAGYRTELSRMTKAGMRVV
LAAPWYINHISYGQDWRVSYNIQPLNFSGTEEQKKLVIGGEVCMWGEYVDATNLTPRLWP
RASAAAERLWSDEKQTSSVDKAFPRLQDFRCKLVRRGIRAEPLYVGHCKHEYQGV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtctatggttagttttggaggatatactcgtccacatgtctatttactactg
cttattctcctcccgcttggccgacacacagttgatggagtttggccattgccgcagact
ttcacctcttcagtggagagataccctctgaacccgcagaccttctactttggatacgga
agacagtcagccgcacagccgggctgctctgtgctggatgctgcattcaagagatatttt
tatcttatctttccagactacataggaaatggtgttctgcgattcagtgaggtcaaacca
tttaatattgagatcagtgtggaccatgaggattgtgagggttacccgaatgaggactca
tctgagagatacaatctgagtgtctctgcaggacaagcatcgctgagtgcagaaaccgtg
tggggtgcagtgagaggtctggaaaccttcagtcagctggtgtatcaagatgattttggc
tcatattttgtgaacaagactgagattgatgacttccctcggtttgcgttcaggggaatt
ttgttggacacttcacgtcactatttaccagtgcacgccattttaaaaactctggatgca
atggcctacagtaagttcaatgtgtttcactggcacattgttgatgacccctccttccct
taccagagcagaacttttccagacctttccagtaagggggctttccatccaatgactcac
atctacacacaatcagatgtgaaaagggtgatctcacatgccaggctgtggggaataaga
gttcttcctgagtttgatacacccggccacacccaatcatggggaaaagggcagcctgac
ctgttgactccctgcttcaaagggagcaccccttcaggtacttttggtcctgttaatcca
atgttgccctccacctaccagttcatggagaaactattcaaggaagtgtcatcagtgttt
cctgattcctatatccacataggaggggatgaggtggacttttcctgctggcaatccaac
ccagatatccgagcattcatgaagaagatgggatttggagtagacttcaccaaactggaa
gcattctacatggagaacattgtgaatatcactgcagccctcaacaagacaactatcgtc
tggcaggatgtttttgactaccatgagcgaattcctaaggacacagtgctgcacatctgg
aagggtgctggatataggacagagctcagcaggatgaccaaagctggcatgagggtcgtg
ctagctgccccatggtacatcaaccacatttcctacggccaggactggcgtgtctcctac
aacatccagccactgaacttttctggtactgaggaacagaagaagctggtgatagggggt
gaagtctgcatgtggggggagtatgtggatgccaccaatctcactccacgtctttggcca
agggcaagtgctgctgcagagagactttggagtgatgagaagcagacctccagtgtggac
aaggcgtttcctcgcttgcaggactttcgctgcaagctcgtgaggcgtggcatcagagca
gagcctctgtatgttggacactgcaaacatgagtaccagggtgtttga
DBGET
integrated database retrieval system
