Anoplopoma fimbria (sablefish): 129109594
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Entry
129109594 CDS
T09102
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129109594 (rbfox1l)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129109594 (rbfox1l)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
129109594
NCBI-ProteinID:
XP_054477671
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All DBs
Position
20:16880622..16891524
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AA seq
383 aa
AA seq
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MLSSPTVILQPYGLPVYPQTTTCYPSMVQGGPSQEAGPGSGDPGLSQVYAPPPSYPPPGQ
GPPTSAGRMPPLDFTSAHHGSEYPEHPQLRVYQGPQLDGSEALTSSNTEDVLAPLTSDPQ
SLTVSVSSGGGAGSGSDDEGSSKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAGEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAEIS
TSGWKINPVMGAMYAPELYTVASFPYPVATPTLAYRGSALRGRGRAVYNTIRSAAATPAA
MPAYPGMVYQDGLYGAEVYGSYPAAYRMAQSASAATATYSDGYGRIYTTAADPYHHSVGP
TTTYGVGTMASLYRGGYNRFTPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcacccactgtgattctccagccttatggactccctgtctacccacagaca
accacatgctaccccagcatggttcagggaggtccctctcaggaggccggcccgggcagc
ggtgaccccggcctgtctcaggtctacgcccctccaccctcctatccaccgcctggtcaa
ggtccaccaacatctgcaggcagaatgccacctcttgattttacctctgcacaccacggt
tcagagtaccccgaacatccccagctcagagtgtatcagggccctcagctggacgggtcg
gaggctctcacatccagcaacacggaggacgttttggcccctttgacctctgacccccag
tcgctgaccgtgtcggtctcatcagggggcggagcaggaagtggaagtgatgacgagggg
tcaagtaaggcccaaccgaaacgcctccatgtctccaacatcccgttccgcttcagagac
ccagacctccgccaaatgtttgggcaatttgggaagatcctcgatgtagaaataatcttc
aatgagagggggtccaagggcttcggatttgtcaccttcgagagtgcgggtgaggctgac
cgagcaagagaaaagctgaatgggacgattgtggaggggagaaagattgaggttaataat
gccaccgcaagagtagttaccaagaagccccagacgcctcttgtgaatgctgaaatttca
acttctggatggaagatcaaccctgtcatgggggcgatgtacgcacctgaactctataca
gttgccagtttcccgtatcccgtagcaactcccaccttggcctaccggggctctgcgctg
cggggtcgaggcagagccgtctacaacactatccgctctgctgcagctacacctgctgct
atgcccgcctaccctgggatggtatatcaggatggactgtatggagcagaagtctatggt
agctatcctgcagcttacagaatggctcaatcagcatctgctgccacggcaacctacagt
gacggatacggacgcatttacacgacagctgcggatccctatcaccactcagttggacca
acgacgacatatggagttggtacaatggccagtttgtacagaggaggatacaaccgcttc
accccgtactga
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