Anoplopoma fimbria (sablefish): 129112358
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Entry
129112358 CDS
T09102
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129112358
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129112358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
zf-RING_10
FapA
ToxN_toxin
LMBR1
Motif
Other DBs
NCBI-GeneID:
129112358
NCBI-ProteinID:
XP_054480403
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All DBs
Position
3:complement(2982221..2985189)
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AA seq
557 aa
AA seq
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MAQKGDQLNRESFSCSICLDLLKDPVTIHCGHSYCMNCIKTHWDEEDEKKLHSCPQCLQT
FTPRPVLGKNTMLADLVEQLKKTGLQAAPADLCYAGPEDVACDVCTGRKLKAFKSCLVCL
VSYCEKHLQPHYDVPQLRKHKLVDPSNKLQENICSRHDEVMKMFCRTDQQCICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVKAINRSADKTVEDSE
KIFTELIRLMEKRSSDVKQQVRSQQRTEVSQVKELQEKLEQEITELKRNDAELQQLSHTE
DHNQFLHNYPSLSALSESTDSSSINIRPLLYFEEVTAAVSEVTDKLQDVLREKWTNVSLM
MTEMIVLLTQPEPKTRAGFLKYSREITLDPNTVNKRLLLTEGNRKATLMSRKQSYSSHTD
RFTGCWQVLSRESLTGRCYWEVEWRGGGVFVAVAYKNISRKGGWDECGFGWNDKSWALRC
DKKNYNFVYNKVQTPVSGPRSSRVGVYLDHSAGVLSFYSVSETMTLLHRVQTTFTQPLHA
GLLFCSFGSTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcagcttaaccgggagagcttctcttgttccatctgtctggat
ctcctgaaggatccggtgactattcactgtggacacagctactgcatgaactgtattaaa
acccactgggatgaagaggatgagaagaaactccacagctgtcctcagtgtttgcagacc
ttcacaccgaggcctgtcctggggaaaaacaccatgttggcagatttagtggagcaactg
aagaagactggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtg
gcctgtgatgtctgcaccgggaggaaactgaaagccttcaagtcctgtctggtgtgtcta
gtctcttactgtgagaaacaccttcagcctcattatgatgtacctcaattaagaaaacac
aagctggtggacccctccaacaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcaacagtgtatctgttatctctgccctgtggatgaa
cataaaggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctg
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagacgtgaagctg
cttcaacaggaggtgaaggctatcaaccgctctgctgataaaacagtggaggacagcgag
aagatcttcaccgagctgatccgtctcatggagaaaagaagctccgatgtgaagcagcag
gtcagatcccagcagagaactgaagtgagtcaagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaacgacgctgagctgcagcagctctcacacacagag
gaccacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacagac
tcatccagcatcaacatccgtcctctgctctactttgaggaggtgacagcggctgtgtca
gaagtcacagataaattacaggacgttctgagagagaaatggacaaacgtctcactgatg
atgactgaaatgattgttttactgacacaaccagaaccaaagaccagagctggattctta
aagtattcacgtgaaatcacactggatccaaacacagtaaacaaacgtctgttattaact
gaggggaacagaaaagcaacattaatgagtcggaaacagtcgtattctagtcacacagac
agattcactggatgttggcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaggaggagtttttgtagcagtcgcatacaagaatatcagcaga
aaagggggctgggatgaatgtggatttggatggaatgataaatcttgggcattaagatgt
gacaaaaagaattataattttgtgtacaacaaagtccaaactcccgtctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctccatgct
ggacttcttttttgttcatttggatccactgctgagttctgtaaactcaaatag
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