Anoplopoma fimbria (sablefish): 129112358
Help
Entry
129112358 CDS
T09102
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129112358
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129112358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_6
U-box
UNC13_3rd
zf-RING_5
zf-RING_10
CRLF3_N
FapA
Motif
Other DBs
NCBI-GeneID:
129112358
NCBI-ProteinID:
XP_054480403
LinkDB
All DBs
Position
3
Genome browser
AA seq
557 aa
AA seq
DB search
MAQKGDQLNRESFSCSICLDLLKDPVTIHCGHSYCMNCIKTHWDEEDEKKLHSCPQCLQT
FTPRPVLGKNTMLADLVEQLKKTGLQAAPADLCYAGPEDVACDVCTGRKLKAFKSCLVCL
VSYCEKHLQPHYDVPQLRKHKLVDPSNKLQENICSRHDEVMKMFCRTDQQCICYLCPVDE
HKGHDTVSAAAERTERQRELEVSRLNIQQRIQDREKDVKLLQQEVKAINRSADKTVEDSE
KIFTELIRLMEKRSSDVKQQVRSQQRTEVSQVKELQEKLEQEITELKRNDAELQQLSHTE
DHNQFLHNYPSLSALSESTDSSSINIRPLLYFEEVTAAVSEVTDKLQDVLREKWTNVSLM
MTEMIVLLTQPEPKTRAGFLKYSREITLDPNTVNKRLLLTEGNRKATLMSRKQSYSSHTD
RFTGCWQVLSRESLTGRCYWEVEWRGGGVFVAVAYKNISRKGGWDECGFGWNDKSWALRC
DKKNYNFVYNKVQTPVSGPRSSRVGVYLDHSAGVLSFYSVSETMTLLHRVQTTFTQPLHA
GLLFCSFGSTAEFCKLK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcagcttaaccgggagagcttctcttgttccatctgtctggat
ctcctgaaggatccggtgactattcactgtggacacagctactgcatgaactgtattaaa
acccactgggatgaagaggatgagaagaaactccacagctgtcctcagtgtttgcagacc
ttcacaccgaggcctgtcctggggaaaaacaccatgttggcagatttagtggagcaactg
aagaagactggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtg
gcctgtgatgtctgcaccgggaggaaactgaaagccttcaagtcctgtctggtgtgtcta
gtctcttactgtgagaaacaccttcagcctcattatgatgtacctcaattaagaaaacac
aagctggtggacccctccaacaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcactgatcaacagtgtatctgttatctctgccctgtggatgaa
cataaaggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctg
gaggtgagtcgactaaacatccagcagagaatccaggacagagagaaagacgtgaagctg
cttcaacaggaggtgaaggctatcaaccgctctgctgataaaacagtggaggacagcgag
aagatcttcaccgagctgatccgtctcatggagaaaagaagctccgatgtgaagcagcag
gtcagatcccagcagagaactgaagtgagtcaagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaacgacgctgagctgcagcagctctcacacacagag
gaccacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacagac
tcatccagcatcaacatccgtcctctgctctactttgaggaggtgacagcggctgtgtca
gaagtcacagataaattacaggacgttctgagagagaaatggacaaacgtctcactgatg
atgactgaaatgattgttttactgacacaaccagaaccaaagaccagagctggattctta
aagtattcacgtgaaatcacactggatccaaacacagtaaacaaacgtctgttattaact
gaggggaacagaaaagcaacattaatgagtcggaaacagtcgtattctagtcacacagac
agattcactggatgttggcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaggaggagtttttgtagcagtcgcatacaagaatatcagcaga
aaagggggctgggatgaatgtggatttggatggaatgataaatcttgggcattaagatgt
gacaaaaagaattataattttgtgtacaacaaagtccaaactcccgtctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctccatgct
ggacttcttttttgttcatttggatccactgctgagttctgtaaactcaaatag
DBGET
integrated database retrieval system
