Anoplopoma fimbria (sablefish): 129113840
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Entry
129113840 CDS
T09102
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129113840 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129113840 (pom121)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129113840 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
PRA1
Motif
Other DBs
NCBI-GeneID:
129113840
NCBI-ProteinID:
XP_054482289
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All DBs
Position
24:8389803..8399986
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AA seq
1306 aa
AA seq
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MRVLRRRAAAMSPREKHLAIILALGVLTLALYYIPTFLFVTLTIAVCCFVCYFLTGEPLP
ARLGLKPRAGVILQSGIRRWFGGWGATGVSVPARGRTKSGRNKTEEGNFRERVAETGIYR
RETLASDSFLFSPRDFLMGSYIGKPESPAADPLRPRAGRNPREQLRERLSRPNHAVYTPN
RRLSFAGEPPGTMGRFTITPQRHYPLQQQGVSSVGVLPPVNWDGFRKKNILSPRNSASVL
SPVTVKIARPDHLGSPSSFDHLSCAGLPKAPVDPCSRESVLKVLKESRKREVEDEDKSFA
TEQKSKRRRNDSGGSAHSAFEPLLPNGTPSQLVPKPGNLKRGITSLAEDSIMKRSRTSSI
SSGTGINSPRGTPGTKRNPIQSSYSSSRGLGQWKKRSAPSSTLSSPGSSRSQTPEGASKR
PREDDGLSPSSASSVRSDHTASDKAPVTSKLTPVPKVPVTTSTDSTGSGGKRKRKIQLVS
SHRDDQISLPPPPELGYTITVKDLDEEKKAALNKIQKVLETPAPEPEKSASPPATVTTQP
AFSTSSTTTTTLSSLLATPLPMASSSAIPVINLDPSPGSSVTKAPATSNPLLEALKMKIS
IPSSSPATANTATVSASTTPVQSSGLTLKVSSTVVTPQLPPASQSHSSSAGMEQPSAFTQ
VLGQVSKAPISAPPVTGTGLFGLASQIGTPAASSSTYPITATATAPASSSASVGNTNPLL
ASGFKPIFSVTTTPTPTSAVTSATESKPPAQNFKPIFGAATTGAGFGQPPPYTTTNPAST
VSLSSTSSMFGGSTTSTMVTPSGFPGLTNVAASTGSITTTQPGAQPAVKSLFGSWSAPST
TSTSSASAQAPNTGSTFQFGSATTTTTAAAPAAAATTTSSNGAFAFGATQPDPQAANQKA
FAFGQQAAPSQNTTTASFGGFAMANTASTTAAPTTQSNFSFGKSSFQAPATQATFGSSAA
PGALSTFGASVASPAPSTFGSSVASPAPSTFGSSVASPAPSTFGSLAPSAAQTTFGSSAP
SAAQTTFGSLAPSAAQTTFGSMAPSAAQSTFGSMAPSAAQTNFGSMAPAAAQTNFGSSAA
PAAQSTFGSSAATTKPFSFGGGGAASSTAASNTAPPPFPFGSTAVTTATSFGTPAKPAFG
ASSTGFGFGSTTAPSAAPSAAPSFGAATQTQSASSATFTFGSAAPQQAPSGPAQHPSSGF
NFGSGMPCPQFGTPVSNNPAPQMGSFNFGAAATDKPAFGTSTPSFGQSAAAAAGPISFGS
PGTPVQGFNAVPFGSPATPSFSIGAGSKPSGARQRLQARRQHNRKK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggcggcgcgctgccgccatgtcacctagagagaaacatttagctatt
atcctagccctaggcgtacttactctcgctctttattatattcccacctttctttttgtg
actttaactatcgcagtttgttgttttgtgtgttactttctcaccggagaaccgcttccc
gccaggttaggcctcaagccgcgggctggcgtgattctccaatccggaatccggcgctgg
tttggcggctggggggcgaccggcgtgtcggtgcccgcgcgggggagaaccaagagcggc
aggaacaaaaccgaggagggaaacttcagagaaagggtcgctgaaactgggatttatcgg
agggaaacattggcaagtgactcgtttcttttcagccctcgggacttcctaatggggagc
tacatcgggaaaccagagagtccagcagccgacccactgaggccgagagcggggagaaac
ccacgagagcagctgcgggagaggctgtccagacccaaccatgctgtgtatacccccaac
aggaggctgtcatttgctggggagccacctggcacaatgggcagattcaccatcaccccc
cagcgtcactatcccctgcagcagcagggtgtctcatcagtgggagtcctacctcctgtg
aactgggatggctttaggaagaagaacatcctcagcccacgaaactctgcgtctgtcctc
agccccgttactgtgaagatcgcccggccagaccatctcggctcccccagtagcttcgac
catctgagttgtgcagggctccccaaggcccctgtggacccctgctccagagaaagtgtt
ctcaaggtgttgaaggaaagccgcaagagagaagtggaggatgaggacaaaagctttgca
actgagcagaaaagcaaacgaaggcgtaatgacagcggaggaagtgcccactctgctttt
gagcctcttctgcccaacggaacgccatcacagctggtccctaagccaggaaacctgaaa
agagggataacctcactggcggaagactccatcatgaagaggtctcgcacgtcctccatc
agctccggcactgggatcaattccccaagaggaaccccaggcacaaagaggaaccctatc
cagagctcctacagttcttcacgaggcctcggccagtggaagaagcggtcagcacccagc
tccactctgtccagccccggatcatctcgctcgcagactccagagggagcctccaaaaga
cccagagaggacgacgggctgtctccgagctcagcatcctccgtgaggtcagaccacaca
gcctcagacaaggcacctgttacttccaaactgactccagtccccaaggtcccagtcact
acctcaacagactctactggtagtggtgggaagagaaaacggaagatccagctggtgtcc
agccaccgggatgatcaaatctctctgcccccacctccagagctgggctacactatcact
gtgaaagacctagatgaagagaagaaggctgccctcaacaagatccagaaagtcctggag
acgcccgctccagagccagagaagtctgcctctcccccagccaccgttaccacccagccc
gccttctctaccagctcaaccaccaccaccaccctgagcagccttctagcaacgcctctg
cccatggcctccagctctgccatcccagtcatcaacctggatcccagcccaggcagcagc
gtcaccaaggctcctgcgacctctaacccactgctggaggctctgaagatgaagatcagt
attccttctagctccccggctactgccaacacagctacagtgtctgcatcgaccacacca
gtacaatccagtggcttgaccctgaaggtttcgtctacagtggttaccccacagctccct
cctgcctcccagtctcattcctcctctgcaggtatggagcagccctctgcctttactcag
gtgctgggtcaggtctccaaggctcccatcagcgctccacctgttacaggaacaggcctg
tttggattggcaagtcagatcggcacccccgctgcttcttcatctacttacccgatcacc
gctactgcgactgctccagccagcagctcagcgtcagtcggtaataccaaccctctgctg
gcttcagggttcaagcccattttttccgtcaccaccacgcccacgcccacctccgcagtt
acatcggccactgagagcaaaccccctgcccaaaatttcaagcccatctttggagctgcc
acgacaggtgctggctttggacagcctccaccctacacaaccacaaacccagcttctaca
gtttctttaagtagtacatcctcaatgtttggtggctctacaaccagcaccatggttacc
ccatctggtttccctggcttgaccaatgtcgcagcctccacgggctccatcaccaccaca
cagcctggagcccagccagctgtgaaatccctctttggaagctggtcagcaccatcaaca
accagtaccagctcagcctcagcgcaggcccctaacacagggagcacatttcagtttgga
tctgctaccaccaccacgactgcagccgcccccgctgctgctgctaccacaacctccagc
aacggcgccttcgcttttggtgccacgcagcctgaccctcaagcagcaaaccagaaggca
tttgcctttggccagcaggcagcacccagccagaacactaccactgcttcatttggaggt
ttcgccatggcaaacacagcctccaccactgctgcccccaccacccagtccaacttctcc
tttggaaagtcgtcgtttcaagcaccggcaacccaggcaacctttggctcctcagcggca
ccaggagcgctgtctaccttcggagcctcggtagcatcgcctgcgccgtctaccttcgga
tcctcggtagcatcgcctgcgccgtctaccttcggatcctcggtagcatcgcctgcgccg
tctacctttggatccttggcgccatcggctgcgcagactacctttggatcctctgcgcca
tcggctgcgcagactaccttcggatccttggctccatcggctgcgcagactaccttcggc
tccatggcgccatcggctgcgcagtctaccttcggctccatggcgccatcggctgcgcag
actaactttggatccatggcgccagcggctgcgcagactaacttcggatcttcggcggca
ccagcagcgcagtcaacattcggatcctcagcagcaaccacaaaaccattcagctttggc
ggtggcggagcagcctcatccacagctgcttctaacaccgcccctcctcccttccccttt
gggtcaactgccgtcaccacagcaaccagctttgggaccccagctaaaccagcattcgga
gccagctccactggttttggttttggaagcaccactgctccctcagctgcaccctcggcc
gcaccgagctttggtgcagcaacccagactcagagcgcctcctcagcaaccttcacattt
ggcagtgctgctcctcagcaggctccctccggtcctgctcagcatccatccagtggattt
aacttcggttctggtatgccatgcccccagtttggaaccccagtctccaataatcctgca
ccgcagatgggaagcttcaactttggggctgctgctactgacaaacctgcttttgggacg
tctaccccatcctttggccagagtgctgctgctgctgcaggtccaatttcctttggaagc
cctggaactccagtccaaggtttcaatgctgttccttttgggtctccagcgactccctcc
ttctctatcggagccggatcaaagccatctggagctcgccagaggctgcaggcgcggagg
caacacaacaggaagaagtaa
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