Alistipes finegoldii: Alfi_3008
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Entry
Alfi_3008 CDS
T02133
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
afd
Alistipes finegoldii
Pathway
afd00521
Streptomycin biosynthesis
afd00523
Polyketide sugar unit biosynthesis
afd00541
O-Antigen nucleotide sugar biosynthesis
afd01100
Metabolic pathways
afd01110
Biosynthesis of secondary metabolites
afd01250
Biosynthesis of nucleotide sugars
Module
afd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Alfi_3008
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Alfi_3008
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Alfi_3008
Enzymes [BR:
afd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Alfi_3008
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFL79253
UniProt:
I3YQI5
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Position
complement(3398704..3399276)
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AA seq
190 aa
AA seq
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MKVLTTAIEGVVILEPEVFGDARGYFFESYSQRRFDAQVRPVRFVQDNESHSRYGVLRGL
HFQKGRYSQSKLVRVVRGRVLDVAVDIRRGSPTFGRHVAVELTEDNKRQFFIPRGFAHGF
AVLSDEATFQYKCDNPYAPESEGAIAWNDPSLGIDWRLAPEDVVLSPKDSAHPLLSEAGE
LFDYNEDYYA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgacaaccgccatagagggcgtggttattctagagccggaggttttcggc
gacgcgcggggttacttcttcgagagctactcgcagcgccgcttcgacgcacaggtccgt
cccgtgcgcttcgtgcaggacaacgaatcgcactcacgctacggcgtgctgcggggcctc
catttccagaaagggcggtactcccagtcgaaactggtccgcgtggtccggggccgcgtg
ctcgacgtcgcggtggatatccgccgtggctcccccacgttcggccgccacgtggcggtg
gagctgacggaagacaacaagcgtcagttcttcatcccgcggggcttcgcgcacggcttc
gccgtgctgagcgacgaagcgacgttccagtacaagtgcgacaacccctacgcccccgaa
tcggagggcgccattgcatggaacgacccgtcgctgggcatcgactggcgtctggccccc
gaagatgtcgtcctctcgcccaaggacagcgcccacccgctgctgtcggaggccggggaa
ctgttcgactataacgaagactattatgcttaa
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