Acidithiobacillus ferrooxidans ATCC 53993: Lferr_2502
Help
Entry
Lferr_2502 CDS
T00758
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Lferr_2502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_2502
Enzymes [BR:
afe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Lferr_2502
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Lferr_2502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACH84696
LinkDB
All DBs
Position
complement(2464624..2465550)
Genome browser
AA seq
308 aa
AA seq
DB search
MPDILSDKQRQFLQLLRMPVPGDPPPELAQAKTTATAADAAANRSVPAPSASEFVPTPLV
ETSVPRPPPVEEQPPVAGSVAPGTALPSSGTAPIPVSGTPPPVPADQASVTAVEAHRTAR
IATLDWRDLSNMVSTCQACPLGQTRKHAVFGAGNPHGSWLFVGEAPGAEEDRRGEAFVGR
AGQLLDNMLQAMGLSRDKDAYIANILKCRPPNNRDPLGPEVHACTPYLQRQIALLQPRVI
VALGRFAAQGLLQVNTPLSQLRGTTQHFQGIPLIVTYHPAYLLRNPIDKRKVWEDLKRAL
GVFAELQK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatcctcagcgacaaacagcgccagttcctgcaacttttgcgcatgcccgtg
cccggcgatccgccgccggagctggcgcaggccaaaacgacggcaaccgccgctgatgcc
gcagcgaaccgatctgtacctgcgccatcagcgtcggagtttgttccgacgccccttgtg
gagacgtccgtgccgcgcccgccccccgtcgaagaacagcccccggtagcaggtagcgta
gcaccaggcacggcactcccatcctcagggaccgcccccattccggtcagcggcacaccg
ccgccggtacctgctgatcaggccagcgtcactgcggtggaggcgcatcgcaccgcccgc
atcgccaccctggactggcgtgacctcagtaacatggtcagtacctgtcaggcctgcccc
ttgggccaaacccgcaaacatgccgtattcggtgcgggcaacccgcacgggtcctggctc
tttgtcggcgaggcgccgggcgcggaagaagaccgccgcggcgaagcctttgtgggtcgt
gccggtcaactcctcgacaacatgctccaggccatgggcctgagtcgcgacaaagacgcc
tacattgccaatatcctcaaatgccgcccccccaacaaccgtgatccgctgggtccggaa
gtgcatgcctgcacgccctatctgcagcgccagatcgcgcttttacagccgcgtgtgatc
gttgccctgggacgctttgctgcgcagggcttgcttcaggtgaatacgccgctcagccaa
ctgcgtggcaccacccagcacttccaaggcattcccctgattgtcacctaccaccccgcc
tatctgttgcgtaaccccatcgacaagcgcaaggtctgggaggatctgaagcgggcgttg
ggggtgtttgcggagttgcagaaataa
DBGET
integrated database retrieval system
