KEGG   Acidithiobacillus ferrivorans: Acife_0306
Entry
Acife_0306        CDS       T01595                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
afi  Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:afi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afi02048]
    Acife_0306
Enzymes [BR:afi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Acife_0306
Prokaryotic defense system [BR:afi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Acife_0306
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII DEAD PSD4
Other DBs
NCBI-ProteinID: AEM46535
UniProt: G0JS27
LinkDB
Position
321608..324787
AA seq 1059 aa
MDYSEDNLVEQPAIGLFAALGWQTVSAQGETFGAGSLLGRETKGEVVLVERLRAALCQFN
PALPPEAINNAVDELTRDRSAMSLEAANRAVYGLLKDGITVSIPDLEHGGQKTERLRVVD
WAQPENNDFLLVSQLTVVGNLYTCRPDLVGFVNGLPWVVIELKKPGVPARAAFDENLTHY
KQQVPNLFWSNALLIASNGTDSRVGSLTAEWDRFFEWKRIEREDEPRRVSLEVMLRGTCD
RTRLLDLVENFTLFSEHKAGVVKILGQNHQFLGVNNAIASMQEARKLGHGRGGVFWQTQG
SGKSFSMVFFAQKVLRTLAGNWTFVVVTDRVELDEQIAKTFKTTGAVSEAEGDECHAGSG
AHLRELLRGNHRYVFTLVHKFQTAEMLSDRSDVIVLTDEAHRSQYDTLALNMRAALPKAT
FLAFTGTPLIASEERTKEVFGDYVSIYDFQQSIEDGATVPLFYENRTPELQLINPDINED
IYDLIEEAELDSEQEARLERELGRQYHLITRDDRLDTVAQDIVRHFLGRGFMGKAMVVSI
DKATALRMYDKVKAHWMAETIRVQQALGELSYLPRGGGMSAEQARCDRQMAELNQRLQVL
TTTDMAVIVSPGQNEIAQMHKLGLDIEPHRKRMNESQPSLDERFKDVDDPLRLVFVCAMW
LTGFDAPSCSTVYLDKPMRNHTLMQTIARANRVFPGKHSGLIVDYANVFASLEQALAIYG
AGKDGHSPVKDKQQLVEELRKAIIDATAFCTRHGVMLDEIEALGAGSLDRLQKIEDAINA
LISPDPLRREFFGYERLVSTLYRAVKPDPTALEFASRVAGLTTLAEVIRVKLNPNPPDIT
QVMSEINGLLDESITGHAIREQGPPALDLSKINFEALVQRFKQSKHKNTDIEVLKAAIRA
QLERMIQLNRTRANFAEKFEALIESYNAGSRSIEELFEELVKLSNSLNDEQERHVREHMS
EEELVIFDILTRPAPALTTEERAEVKKAARELLARLKVLLVLNWRQKSTARSQLKLTIED
TLDSALPRAYTPELYNQKCSAVFEHVYESYPERNVGVYA
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggactacagcgaagataacctcgttgaacaacccgccattgggctgtttgccgcgctg
ggctggcaaaccgtgtcggcgcagggtgagacgtttggtgcaggcagcctgcttgggcga
gagaccaagggcgaagtggtgttggtggaacgcctgcgtgccgcgctgtgccagttcaac
cctgcgctgccaccggaggcgatcaacaatgcggtggatgaactgacccgcgaccgttca
gcgatgagcctggaggcggcgaaccgtgcggtgtacgggctgctgaaagacgggatcacg
gtgtcgattcccgatcttgaacacggcgggcagaaaaccgaacgtctgcgcgtggtcgat
tgggcgcagcccgaaaataatgacttcctgctggtgagccagttgacggtggtgggcaat
ctctacacctgccgccccgatctggtcggcttcgttaatggcttgccctgggtggtgatc
gaactcaagaagccaggcgtgcctgcccgagcggccttcgatgaaaacctgacgcattac
aagcagcaagtgcccaatttgttctggagcaatgcgttgttgatcgccagcaatggcacc
gatagccgcgtgggttcgctcaccgccgagtgggatcggttcttcgaatggaagcgcatc
gagcgtgaggacgagccgcgtcgagtgtcgctggaagtgatgctgcgcggcacctgcgac
cgaacacgtctgctcgatctggtcgagaacttcaccctgttttccgagcacaaggccgga
gtggtcaagattcttggtcagaaccatcaattcctcggcgtcaacaacgccatcgcctca
atgcaggaagcccgcaagctgggtcacggacgcggtggcgtgttctggcaaacccaaggc
agcggcaagagcttttcgatggtgttcttcgcgcagaaagtgctgcgcacgctggcaggg
aactggacgttcgtcgtcgtcaccgaccgggtggagctggacgagcagattgccaagact
ttcaagaccaccggcgcggtgagtgaggccgagggcgacgaatgccacgcgggtagtggt
gcgcatctgcgtgagctgctgcgcggcaaccatcggtacgtgttcacgctggtgcacaag
ttccagacggctgagatgttgagtgaccgctcggacgtgatcgtgctgaccgacgaggcg
caccgcagccagtacgacaccttggcgctgaatatgcgtgccgccttacccaaggccact
tttttggcctttaccggcacaccgctgatcgccagtgaggaacgcaccaaagaagtattc
ggcgattacgtctcaatctacgacttccagcaatcgattgaagacggtgccacggtgccg
ttgttctatgaaaaccgcacgccggaattgcagctcatcaaccccgacatcaatgaagac
atctacgacctgatcgaagaagccgagctggattctgagcaggaagcgcgactggaacgc
gagttggggcggcaatatcacctgattacccgcgacgatcggctggatacggtggcgcaa
gacatcgtgcgccattttcttggacgcggttttatgggcaaggcgatggtggtgtccatc
gacaaggccaccgcgctgcgtatgtacgacaaggtcaaagcgcattggatggccgaaacg
atccgtgtgcagcaggcgttgggtgagttgagttacctgccgcgcggcggggggatgtcg
gcggaacaggcgcgatgtgatcggcaaatggctgaactgaaccaacgtttgcaggtgctc
accaccacggatatggcggtgatcgtttcaccaggacagaacgaaatcgcccagatgcac
aagctggggctcgatattgagccgcaccgcaaacgcatgaacgaatcacaaccgagcctg
gatgaacgcttcaaggatgtggatgaccccttgcggctggtcttcgtgtgcgccatgtgg
ctgactggattcgacgcgccgagttgctccactgtgtatctcgataagccgatgcgcaac
cataccctgatgcagaccattgctcgcgccaatcgggtcttccccggaaagcatagcggc
ctcattgtcgattacgccaacgtctttgcgtccttggaacaggcgctggccatttacggc
gcgggcaaggatggtcacagcccggtcaaggacaagcagcaattggtggaagagttgcgt
aaggcgattattgatgcgactgccttctgtacccgtcatggcgtgatgctggatgagatt
gaggcactgggcgcgggcagtttggatcgcttgcagaagattgaagacgcgatcaatgcg
ttgatttcccccgatccgctgcggcgtgagtttttcggctatgaacggctggtgagtacc
ctttatcgtgcggttaaacctgacccgacggcactggagtttgccagtcgggtggctggc
ctgaccacactggccgaggtcattcgcgtcaagctgaacccgaacccgccggacatcacg
caggtgatgagcgagattaacggcctgcttgacgagtccatcaccggacacgccattcgt
gagcaggggcctccggcgctggatctctccaagattaacttcgaggcgctggtgcagcga
ttcaaacagtccaagcacaaaaacaccgatatcgaagtgctcaaagccgccatacgcgcc
caactggaaagaatgatccagttaaatcgcacccgagccaactttgccgagaagttcgaa
gcactgatcgaaagctacaacgcgggcagccgcagtatcgaggaactgttcgaggagctg
gtcaagctgtcgaacagcctgaatgatgagcaggaacggcatgtccgcgagcacatgagc
gaagaagaattggtcatcttcgacatcctgacccgtccggccccggcgctcacgaccgaa
gagcgcgccgaagtgaagaaggctgcccgtgaattgttggcgcgcctgaaggtgctgctc
gtcctgaactggcggcaaaaatccacggcgcgctcgcagttgaagctgaccattgaggac
accctcgacagtgcattgccccgcgcctatacgcccgaactgtacaaccagaaatgctcg
gcggtgtttgagcatgtgtacgaaagctaccctgaacggaatgttggggtctatgcatga

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