Acidithiobacillus ferrivorans: Acife_0977
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Entry
Acife_0977 CDS
T01595
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
afi
Acidithiobacillus ferrivorans
Pathway
afi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Acife_0977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afi03400
]
Acife_0977
Enzymes [BR:
afi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acife_0977
DNA repair and recombination proteins [BR:
afi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Acife_0977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
zinc_ribbon_12
zinc-ribbons_6
AAA_30
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AEM47147
UniProt:
G0JNB7
LinkDB
All DBs
Position
complement(1002083..1004245)
Genome browser
AA seq
720 aa
AA seq
DB search
MSDEANCIQVAVMVPLRRIFSYALPPEGHLQPGIRVRVPFGKGKRVGIVLGYASCPPDIM
LKTIEQVLDAHPILPIALQQLIHFGATYYHHPLGDAWATALPTLLRQGRPLPKPTPWGYR
LSASEAPTAARQPGKLQQALRELLITTGVVPEAEIPKELRPILRQAIRKGWIETVAEVIS
PKPAVPSPHRLNAEQESAVTQLRMAKGFKAWLLEGVTGSGKTEVYLEAIRPHLESGAQAL
ILVPEIGLTPQLVERCQTRFGEHRVAALHSAQGDGERLRIWAAAAAGQIQVVIGTRSALF
VPLPRLAMIIVDEEHDPSFKQQNGWHYSARDLAIQRARLENIPIVLGSATPSLESLYNAQ
KGRYQHLELRQRATSADLPKMTIVPLRRENLQGGISSTLLTACKETLEAGNQVLLFLNRR
GYAPAVLCHDCGHVLQCPRCSAPMTWHRQQERLRCHHCSHESHWPPVCPACRSAVLVTVG
QGTEQLEETLRQRFPQTPIWRIDRDALHGRDALATAVSDIHRNRAAILVGTQMLAKGHHF
PAVTLVGIINTDQGLFSADFRAPERLLQTVLQVAGRAGREERPGRVLLQTHLPEHPLLQS
LAQGDYRPPAQALLDERRAAGLPPFGALTLLRAEAHQRCRVDEFLKAACQCAPPALVEIS
GPTPSLMERRAGFERAELWIQAPGRAQMQKALKLWLPQFAELHSARNVRWMLDVDPLLIT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaagcaaactgtattcaagtagccgtcatggtaccgctccgccgcatcttt
tcttacgccctgccgccagagggccatctacagccgggcatacgagtgcgggtacctttc
ggcaaaggcaagcgcgtagggattgttctcggctatgccagttgcccgcccgacatcatg
ctcaagactattgaacaggtcctggacgcgcatcccattttacccattgccttacagcaa
ttgattcacttcggagcgacatactaccatcacccgctcggtgatgcctgggctaccgcc
ctgccgaccctgctgcgccaaggtcggccgctgccaaaacccactccctggggttaccgc
ctcagtgctagcgaagcaccgacggcagcacgccagcctggaaaattgcagcaagcgctc
cgggaattgctcatcaccacgggtgtggtgcctgaagcagaaattcccaaagaattacgc
cccattttacggcaggccatccgaaagggctggatagaaacggtggcggaagtcatctca
cctaaaccagcggtaccctctccacaccgcctgaatgcggaacaagaaagcgccgtgacg
caattacgcatggccaaaggctttaaggcgtggttactggagggagtgactggcagcggt
aaaacagaagtgtatctggaagcaatccgacctcatctggaatccggagcacaagccctc
attctggtcccagagatcggtctcaccccccaactcgtagaacgttgccaaacgcgtttt
ggcgagcatcgcgtagccgccctgcactctgcacaaggcgacggcgagcgtttgcgcatc
tgggcagcggcagcggccggacagattcaggtcgtcattggcacccgctcggcacttttc
gtgcccctgccccgtcttgccatgattattgtcgatgaagagcatgacccctcttttaag
cagcagaatggctggcattattcggcacgggatctggcgattcagcgcgcacgcctagaa
aatattcccattgtcctcggctctgccacgccctctctggaaagtctctacaacgcgcaa
aagggccgttatcagcacctagaactacgccagcgcgccacttcagccgatttaccgaag
atgacgatcgtaccactgcgccgcgaaaatctgcagggtggcatttcctctaccctgtta
acggcgtgtaaggaaaccttggaagcaggcaatcaggtattactgttcctgaatcgtcgg
ggctacgctccagcagtactctgccacgattgtggccatgtgctgcagtgccctcgttgc
agcgcgcccatgacctggcatcgccaacaggaacgcctccgctgtcatcattgcagtcac
gaatcgcactggccaccggtctgccccgcctgccgcagtgcggtgctggtcaccgtcggc
caaggcactgagcaactggaggagacacttcgccagcgcttccctcagacccccatttgg
cgcatcgaccgcgacgcattgcatggtcgtgatgccctcgccacagcggtctccgacatt
caccggaatcgtgctgccatccttgtgggtacccaaatgctggctaagggacatcacttc
ccggccgtcaccctggtcggcattatcaatactgaccagggtttgttcagcgctgatttt
cgcgctcctgaacgattgttgcagaccgttctgcaagtagccggccgcgccggccgcgaa
gagcggcctggccgggtactcctacagacccatctgcctgaacatcctttactgcaaagc
ctcgcccagggcgactaccgtcctccggcgcaggcgctcctggatgagcgccgggctgcg
gggctaccgccatttggcgccctcaccctgctgcgtgccgaggcgcaccaacgctgccgg
gtagacgaattcctgaaggccgcctgccaatgtgcaccacccgccctggtggagatcagt
ggtccgacgccgtcgctcatggagcggcgtgccggtttcgagcgtgcagagctttggata
caagcaccaggccgggcccaaatgcagaaagcgcttaaactctggctaccacagtttgcc
gagctacactccgccagaaatgttcgctggatgcttgatgtcgatcccttactgatcacc
tga
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