Acidithiobacillus ferrivorans: Acife_2387
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Entry
Acife_2387 CDS
T01595
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
afi
Acidithiobacillus ferrivorans
Brite
KEGG Orthology (KO) [BR:
afi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afi03021
]
Acife_2387
Transcription machinery [BR:
afi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acife_2387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_20
HTH_3
Phage_TAC_7
KORA
Motif
Other DBs
NCBI-ProteinID:
AEM48483
UniProt:
G0JPE2
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All DBs
Position
2387376..2388233
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AA seq
285 aa
AA seq
DB search
MYTEARESRDSDIPDMGPAIDPPPLDDFIDDENSGPFLSQKQELQLIHRLRQGDECARAT
LISAHMPLVKAVARGYRNKGLSQEDLLQEGYMGLLRAADRFREGLGTRFSSYATWWIREA
MQRALIRSRFIRLPDYLAKSLHAYLQRGEEKDSDLDVRREQRREALGVRESTMRALDFAD
IRVFSLDEEMSDGPSRIEQVSGDIVGPDNEYDRDAICKALRGHLTELNEKQREVMVFRYG
MHGDAPMTLEAVAERMGVSREAVRQLQVRALSRLRQSLSDSGWGV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgaagccagggaatcgagggattcagacattcctgatatgggtcccgccatt
gatccgccacctcttgatgatttcatagacgacgaaaacagtggacccttcctcagccag
aaacaggaactgcaactcatccatcgactgcgccaaggtgacgaatgcgctcgcgccacc
ctcatctctgcccacatgcccttggtgaaggcggtcgcccggggttatcgcaacaaagga
ctgagtcaggaggacctccttcaggagggatatatgggcctgctacgcgccgccgaccgg
tttcgggaagggctcgggacacgcttttccagctacgcgacctggtggattcgcgaagcc
atgcaacgggcactcatccgctctcgcttcatacgcctgcctgactatcttgccaagtcc
ctgcacgcttatttgcagcgcggagaggaaaaagacagcgacctcgatgtgcgccgcgag
cagcgccgcgaagctcttggggtacgcgagagcaccatgcgcgcgctggattttgccgat
attcgtgtcttctctctcgacgaagaaatgtccgacggacccagccgtatcgaacaggta
tctggcgacattgttggtcctgataacgaatacgaccgcgacgccatctgcaaagcgcta
cgcgggcatctgacggaactcaacgaaaagcaacgggaggtcatggtgtttcgctacggc
atgcatggcgatgccccgatgaccctggaagccgtagccgaacggatgggtgtcagccgc
gaggcggtaagacaattacaggtgcgggccctgtcccgcctgcgtcaatcattaagtgat
agtggctggggcgtctga
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