Anoxybacillus flavithermus: Aflv_2725
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Entry
Aflv_2725 CDS
T00790
Symbol
rho
Name
(GenBank) Transcriptional terminator Rho
KO
K03628
transcription termination factor Rho
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Aflv_2725 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afl03021
]
Aflv_2725 (rho)
03019 Messenger RNA biogenesis [BR:
afl03019
]
Aflv_2725 (rho)
Transcription machinery [BR:
afl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Aflv_2725 (rho)
Messenger RNA biogenesis [BR:
afl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Aflv_2725 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Spore_III_AA
DUF6417
Motif
Other DBs
NCBI-ProteinID:
ACJ35078
UniProt:
B7GMH6
LinkDB
All DBs
Position
complement(2710887..2712173)
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AA seq
428 aa
AA seq
DB search
MELGDLTIATLENMTIKELYELARQYKISYYSKLTKKELIFAILKARAEQDGLFFMEGVL
EIIQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHV
EAVNGEDPEIAKERVHFPALTPLYPNRQMKLETTPDKLSTRLIDLIAPIGFGQRGLIVAP
PKAGKTMLLKEIANSITTNHPDVELIVLLIDERPEEVTDIERSVSADVVSSTFDEVPENH
IKVAELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRIFPAID
IRRSGTRKEELLIPREHLEKLWTIRKTMSDTPDFIERFIHRLKQTKTNEEFFAMLDEEWK
AAGNLKRL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagttaggagatttaacgattgcaacgctggaaaatatgacgattaaagagctatat
gagttagctcgccaatacaaaatttcgtattacagtaaactgacaaagaaagaattaatt
tttgcgattttaaaagcgcgtgcggaacaagacggcctctttttcatggaaggtgtgctt
gaaattattcaatcagaaggatttggttttttacgtccaattaactattccccgagttcg
gaagatatttatatttccgcatcgcaaattcgccgctttgatttgcgcaacggtgataaa
gtatcaggaaaagtacgccctccaaaagaaaacgaacgatatttcggtctgctacatgtc
gaagctgtaaacggagaagacccagaaatcgcaaaagagcgcgttcacttcccagcgctt
acgccgctttatccaaaccgacaaatgaagctcgaaacgacaccggacaagctatcgact
cgcctcatcgatttaatcgctccgattggattcggtcagcgcggtttaattgtcgcgcct
ccaaaagcgggaaaaacgatgttgttaaaagaaatcgccaacagcattacaacaaatcac
ccagatgttgagctcatcgtcttactcattgatgagcgtccagaagaagtgacggatatt
gaacgttccgtatcggccgatgtcgtgagctcgacgtttgatgaagtgccagaaaatcat
attaaagtggcggagcttgtgcttgaacgcgcgatgcgccttgttgaacataaacgtgac
gtcgtcattttaatggatagtattacgcgtttagcgcgcgcatacaacttagtcattccg
ccgagcggacgaacgctttcaggaggaattgatccggctgcattccaccgtccgaaacgg
tttttcggagcggcgcgaaacattgaagaaggtggcagtttaacgattttagcgaccgct
cttgttgatacagggtcgcgcatggatgatgtcatttacgaagaatttaaaggaacggga
aatatggagcttcatcttgatcgctcattagcggaaaaacggattttccctgccattgac
attcgtcgttcaggtacacgaaaagaagaattgttaattccgagggaacatttagaaaaa
ttgtggacgattcgcaagacgatgtcggatacgccagactttattgaacggtttattcac
cgattaaagcaaacgaaaacgaatgaagagttttttgcgatgttagatgaagagtggaaa
gcagctggaaatttaaaacggttataa
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