Alteriqipengyuania flavescens: QQW98_13590
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Entry
QQW98_13590 CDS
T09518
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
aflv
Alteriqipengyuania flavescens
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflv03019
]
QQW98_13590 (hrpB)
Enzymes [BR:
aflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QQW98_13590 (hrpB)
Messenger RNA biogenesis [BR:
aflv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QQW98_13590 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
Flavi_DEAD
HA2_N
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WJY18620
LinkDB
All DBs
Position
complement(2661689..2664106)
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AA seq
805 aa
AA seq
DB search
MSDLPIHAVLPDLLDGLRTGTGAVLVAPPGAGKTTAVAPALLDEPWCDGTVLLLSPRRVA
ARAAAERMAAQLGEKAGETIGYATRLDTRQSARTRVLVVTEAIFVNRILADPELPGVSAV
LFDEAHERHLDSDLGLALALESRAILREDLRVVVMSATIDGARFAGLLGDDTPVIESEGR
AHPLRIEWLGARAEQRIEDRVASAIRQAWRDEAGDILAFLPGVGEIERVRERLAEAMPNT
PVLPLHGQVEPRAQQAAIRRDPDGRRRIVLATAIAETSLTLDGVSVVVDSGLSRRAEFDQ
AVGSNRLVTVRASQAAAAQRAGRAARQGPGVAYRLWEEGGHGGRQAFDPPEIAAVDLAPL
VLSLARWGTGDPAALPWLDEPPPASIASARERLGRLGALEDGRLTAFGEKVAALPMDPAQ
AAMVLYGAKAGDATVAAKLALLLQERGLGGRSEDLLARLQRWDGDRSARAEASRKLAARW
AKSAEALVDTVDPTQGDPGIYLARARPDFVARRRDKSGESWQSIGGRGFALDPASPLACA
DWLAIGDAQGSAKGARITAAIAMEESDVARALSHLATQRRTVRWNAKEGRVEARLEQRIG
AVSIASGPDPEPDAQQVEAALLEAARGRLADLLPASLLARARYAAIDALSPEALVENAGQ
WLAPLLSGKRTLDIPAAQLAEAALSLVGWDTRQRLDTVAPRQWTSPAGTQHAVDYAAEGG
PTVEVRVQALFGLDRHPMVGSTPLLLQLTSPAGRPIQATRDLPRFWRGSWADVRKDMKGR
YPKHRWPDEPWAEAPSLKTKNAFNR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacctacccatccacgccgtcctgccggacctgctggacggcctgcgcaccggt
accggcgcggtcctggtcgcaccgccgggggcaggcaagaccaccgccgtcgctcccgcc
ctgctggacgagccgtggtgcgatggcaccgtactcctgctcagcccgcgccgcgttgcc
gcccgtgcggcggcggagcgcatggccgcgcagctcggcgaaaaggccggcgagacgatc
ggctacgcgacacggctcgacacgcggcaatcggcgcgcacgcgcgtcctcgtcgtcacc
gaggccattttcgtcaatcgcatcctcgccgatccggaattgccgggcgtctccgccgtc
ctgttcgacgaggcgcacgagcggcacctcgacagcgacctcggcctggccctcgcactg
gaaagccgcgccatcctgcgcgaggacctgcgcgtggtggtaatgagcgccacgatcgac
ggcgcgcgctttgccgggctgttgggcgacgatacgcccgtcatcgaaagcgagggccgc
gcgcatcccctgcgcatcgaatggctgggcgcgcgtgcggagcagcggatcgaggaccgc
gtggcgagcgcgatccgccaggcctggcgcgacgaggcgggcgatatcctcgccttcctg
cccggcgtgggggaaatcgagcgcgtgcgagaacggctggccgaagcgatgccgaacacg
ccggtcctgccgctgcacggccaggtcgagccgcgcgcgcagcaggcggcgatcaggcgc
gatccggacggaaggcgacgcatcgtcctcgccaccgctatcgccgagacgtcgctgacg
ctcgacggcgtgtcggtggtggtcgacagcggcctgtcgcggcgcgcggaattcgaccag
gccgtgggctccaaccgcctcgtgaccgtccgggcaagccaggctgcggccgcgcagcgg
gcagggcgcgcggcgcggcaggggccgggcgtggcctaccgcctgtgggaagagggcggg
cacggcgggcggcaggctttcgacccgccggagatcgcggcggtggacctcgccccgctg
gtcttgtcgctcgcccgctggggcacgggcgatcctgccgccttgccgtggctcgacgag
ccgccccctgcctccatcgcctcggcgcgcgagcggttgggcaggctgggcgcactggag
gatggcaggctgaccgcttttggcgagaaggtcgccgcgctgccgatggacccggcgcag
gcggcgatggtgctctacggcgcaaaggccggcgatgcgacggtggcggccaagcttgct
ttgctgttgcaggagcgcgggctcggcgggcggagcgaggacctgctcgcgcgcctgcaa
cgctgggacggcgatcgctcagcccgggcagaggcgtcgcgaaagctggccgcgcgctgg
gcaaaatcggcggaggccctggtcgacacggtcgaccccacccagggcgatcccggcatc
taccttgcccgcgcgcggcccgacttcgtcgcgcggcggcgcgataagtcgggcgagagc
tggcaatccatcggcgggcgcggcttcgcgctcgatcccgcatcgccgcttgcctgcgca
gactggctcgccatcggcgatgcgcagggcagcgccaagggtgcgcgcatcaccgccgcg
attgccatggaagaaagcgacgtcgcccgcgccctctcgcatctcgccacgcagcgccga
accgtccgctggaatgcgaaagagggcagggtcgaagcgcggctggagcagcggatcgga
gcagtctcgattgccagcggtcccgatccggagcccgacgcccagcaggtggaagcggcg
cttctcgaggctgcacgcgggcgcctggccgatctcctgcccgccagcctgctggcccgc
gcgcgctatgccgcgatcgatgcgctgtcacccgaagcactcgtggagaacgccggccaa
tggctcgctccgctgctctcgggcaagcgcaccctcgacatcccggccgcgcagcttgcc
gaagcggcgctgtcgctggtgggttgggacacgcgccagcgcctcgacacggtggctccg
cgccagtggaccagccccgccggcacgcagcacgcggtggactacgcggcggagggcggc
ccgacggtggaggtgcgggtgcaggcgctgttcggcctcgaccgccaccccatggtcggc
agcacgcccctgctgctccagctgaccagcccggcgggccgcccgatccaggcgacccgc
gacttgccccgcttctggcgcggcagctgggccgatgtacgcaaggacatgaaagggcgc
tatcccaagcaccgctggcccgacgagccctgggcagaggcgcccagcctgaaaacgaag
aatgccttcaatcgctag
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