Aspergillus fumigatus: AFUA_1G13060
Help
Entry
AFUA_1G13060 CDS
T01017
Name
(RefSeq) regulator of nonsense transcripts
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
afm
Aspergillus fumigatus
Pathway
afm03013
Nucleocytoplasmic transport
afm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AFUA_1G13060
03015 mRNA surveillance pathway
AFUA_1G13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_1G13060
Enzymes [BR:
afm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AFUA_1G13060
5.6.2.5 RNA 5'-3' helicase
AFUA_1G13060
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AFUA_1G13060
mRNA cycle factors
Common to processing body (P body) and stress granule
AFUA_1G13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
SLFN-g3_helicase
UvrD-helicase
PIF1
Helicase_RecD
nSTAND3
AAA_22
AAA_16
ATPase
Motif
Other DBs
NCBI-GeneID:
3510207
NCBI-ProteinID:
XP_752676
UniProt:
E9QTE7
LinkDB
All DBs
Position
1:complement(3463581..3466888)
Genome browser
AA seq
1079 aa
AA seq
DB search
MAAIGDGRAPAELDETTLNMTGGPRPRRHDDEDDGSDNFGDDDVDSVTSAAVTGRRQNEG
NLEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQL
HPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQ
PLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAVDDEP
APVLLRYDDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPK
LELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTEC
THNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV
PGLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNV
AVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELG
ELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPE
CMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMH
PCLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYL
NRTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVAS
VDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLW
NCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQSYRGPQRFQMAYNHASNVTSGMMNGRN
GHRNEFHDTGSVIGYIPDDVSSVHSSALGGVSIPSGYPPMFQNFADAWPALPGARRANGA
RGKGAPSVAGESVAATESDITGSIIDGRSVDQGGVSLAGLSINDMSKQPSLSQSDRLKRY
VESGGREPYRAGVPDNGSIFGGSSASIRVTRGVPGHVHDDDDTRSVSTAFASQVGGNYD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggctgctattggcgatggtagggctccagcggaactcgatgagactactttgaacatg
accggtggaccgcgcccaaggagacacgacgatgaagatgatgggtcggataatttcggt
gatgacgacgtcgacagtgttaccagtgccgctgtgactggccgcaggcaaaatgagggc
aatcttgaggaggagaaggagctccctccgcatgcatgcgcttattgcggtattcataat
ccgagcagtgtggtaaaatgcctggcttgtagcaagtggttttgcagtgctcgtgggaac
acatcttcttcacatatcgtcaaccatcttgtccgagctcgccacaaggaggtccagctt
caccccgcctcgtccctgggcgacactatcctggagtgttacaactgcggaactaagaat
gtttttctactgggttttattccagccaaatccgatacagttgttgttttgctttgtcgt
cagccctgtgctgccatgccgtcttcaaaggatatgaactgggacacttcgcgctggcag
ccactgattgaggatcgctcattcctgccatggcttgttgccgcaccatcagaccaagag
cagctccgagcccggcatcttagtccgcagctaatcgcaaaactggaggaaatgtggaag
gagaattcccaggcgacttttgcggacctggagaaagccacggcggtagatgacgagcct
gcgcctgttctcttacgttatgacgatgctttccagtaccaaaacatcttcggtcccctg
gtaaagattgaagcagactacgatcgtaagctgaaggaatctcaatcacaggatggtctc
atcgtccgttgggatcttggcttgaacaacaagcatcttgccagcttcattctgcccaag
ctcgagcttggagatgtgaaattggcggtgggagatgagatgcgcctcaagtacaccggt
gagctacggcccaaatgggagggtgtgggatacgtcataaagattcccaacaatcaatct
gatgaagtgacaatcgagttacgcgctaagggtgatcacaagtctgtacccactgaatgc
acccacaacttcacagcggactatgtctggaaatcaacctctttcgatcgtatgcagctc
gccatgaagactttcgctgttgacgaaatgagcgtgtccggttatatcttccatcgcctc
cttggacatgaagttgccgctgcaccgatgaagactcagctaccgaaaaaattcagtgtt
cctggcttgcccgagctcaacggaagccagatcaatgcagtcaaaagtgtgctacagcgg
cccatgagcttgattcagggtcccccaggaaccggaaagactgttacgtctgccacgatt
atttaccatctcgcaaagatcaacggaggtcaagtcttagtctgcgcaccatctaacgtt
gcggtcgatcagctgtgcgagcgtattcacaggactggtctcaagacagtacgtgtgact
gccaagtcgcgtgaggatgttgagtcacccgtgggcttcctttccctgcacgagcaagtt
cggctgaacgacagcaacattgaactcatcaagctcaaccagctcaaggccgagctgggc
gaattgtcgagtcaagacgagaagcgtttgaagcagctcactcgttctgctgagcgtgag
attttgaacaatgccgacgtcatttgctgtacttgtgtcggcgctggcgacccgcggctt
gcgaagctcaagttccgcaccgtcttgattgatgaatcgacgcagtcggctgagcctgag
tgtatgattccactggttcttggttgcaagcaggtcgttctggttggtgatcaccagcag
cttggacctgttattatgaacaaaaaagcggctaaagcgggcttgaaccaatccctcttt
gagcggctcgttatcctcggctgctcccctattcgattgaatgtgcagtaccgtatgcac
ccgtgcttgtcagagttcccatcgaatatgttctatgaaggatctttgcaaaatggagtc
tctgcttttgaccgacttcgccgtgacgtggatttcccttggcctgtcgttgacagtccc
atgatgttctggtccaaccttggcaacgaagagatttcggcgtcaggaacttcgtatctg
aaccggaccgaagctacaaatgtggaaaaaattgtgacccgcttcttcaaggccggtgtg
caaccagccgacattggtatcatcacgccttacgagggtcaacgaagttacatcgtcagc
tctatgcaggctaatggcacattcaagaaggagcactacaaagaaatcgaagttgcgtct
gttgatgctttccaaggccgagagaaagacttcattatcctttcctgtgtgcgttccaac
gaccaccaaggcatcggtttcttgagtgatccgcgtcgtctgaacgttgcgcttacccga
gcgaaatatggtctggtcattcttggaaatccaaaggttctgtccaagcatccactgtgg
aactgcctactgcaacatttcaaggaaaggcactgtcttgtggaggggcccctgtccaac
cttcaggagtctctcattcaattcagtcgcccaaagcagtcatatagaggtccacaacgg
ttccagatggcttacaaccatgcatccaacgtcaccagtggaatgatgaacggtcggaac
ggtcaccgaaatgagttccatgacaccggctcggtgattggctatattcccgatgatgtc
tcctccgtacactcctctgctcttggaggcgtcagtatcccctcaggatatcccccgatg
ttccagaactttgcggacgcctggcctgctcttcctggtgccagacgagctaatggggcc
agaggaaaaggagcacctagcgttgccggcgaatctgtggcagctactgagtccgacatt
acgggaagtatcatcgatggaaggagcgttgatcagggcggtgttagtcttgctggtttg
agcatcaacgacatgagcaagcagcctagtctcagtcaatctgacaggttgaaacgttac
gtggaatcgggcggacgggagccgtacagggctggcgttcccgacaacggtagcatcttt
ggaggaagctctgccagcatccgtgtgactcgcggtgttcctggacatgttcacgatgat
gatgacactcgcagcgtctccaccgcttttgcgagccaagtcggaggtaactacgattga
DBGET
integrated database retrieval system
