Aspergillus fumigatus: AFUA_5G04333
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Entry
AFUA_5G04333 CDS
T01017
Name
(RefSeq) RNA polymerase TFIIH complex subunit Ssl1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
afm
Aspergillus fumigatus
Pathway
afm03022
Basal transcription factors
afm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AFUA_5G04333
09124 Replication and repair
03420 Nucleotide excision repair
AFUA_5G04333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afm03021
]
AFUA_5G04333
03400 DNA repair and recombination proteins [BR:
afm03400
]
AFUA_5G04333
Transcription machinery [BR:
afm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AFUA_5G04333
DNA repair and recombination proteins [BR:
afm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AFUA_5G04333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
5077159
NCBI-ProteinID:
XP_001481497
UniProt:
A4DA11
LinkDB
All DBs
Position
5:1164833..1166352
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AA seq
456 aa
AA seq
DB search
MADSDEEYVGEVSDEENDVNGIRYARETVPASRPKRRRQRGGAEWEVSRTWETLVEGADG
TISSTVEGLLEAGKRKRLLRDTTPLQRGIIRHLILILDLSQSMAEKDLRPTRYLLSLRYA
QEFVREFFEQNPISQLGVLGLRDGLAIRVSDMSGNPTEHISAIQALRDHDPKGLPSLQNG
LEMARGALFHTPSHGTREVFVIFGSILSSDPGDIHQTITTLINDKISVRIAGLAAQVAIC
RELCSRTNAGDDTTYGVALNEQHFRELMMDVTTPPVTYSQKKATSSLLMMGFPSRTVETC
PSLCACHSEPSCGGYLCSRCNSKVCGLPAECPSCGLTLILSTHLARSYHHLFPLMNWIEV
PWQRASRSLTCFACGIYFPTVPPKDQWQATESQAKGMSVSSRYECTVCKNHFCIDCDLFA
HEIVHNCPGCQSGISGLAIADRPRGQTGTEEMDTST
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcggacgaagagtacgttggcgaagtttctgacgaagagaacgatgtcaac
ggtatccgatatgcccgggaaacggtgcctgcatcccgtcctaaacggagaaggcagcgc
gggggtgctgaatgggaggtttcgaggacttgggagaccttggttgagggtgctgatggc
acaatcagctctactgttgaaggacttttagaagctgggaaaaggaagagacttctaaga
gatacaactccattgcaacgtggtataatccgacatctcatcttgattttggatttgtcc
cagtctatggccgagaaagatctaaggccgacgcgataccttctttccctgagatatgca
caagaattcgtgcgggaattttttgagcagaatcccatatcccagcttggtgtgcttggc
ttgagggatggtcttgcaatccgggtcagtgatatgagtggcaaccctacggagcacatc
agtgctatacaagctctgagggatcatgaccccaagggccttcctagcttgcagaacggg
cttgaaatggcgcgtggtgctttatttcatactcctagtcatggaacccgagaagtattt
gtgatcttcggatctatcctttcctctgatccgggcgatatacatcagacgatcaccacg
ttgataaatgacaagatcagtgtcaggattgctggtttggccgctcaggtggctatctgt
cgtgaactctgctctaggactaatgcaggcgacgacaccacatatggcgtggcgctcaac
gagcaacacttccgtgaattaatgatggatgtaacgacaccccctgtgacatattcccaa
aaaaaagccacgagctcccttttgatgatggggtttccgtctcgtactgtggagacgtgt
ccctctctgtgtgcgtgtcattctgaaccctcttgtggagggtacttatgttcacgatgc
aatagcaaagtctgtgggctccctgctgaatgcccctcttgcggtcttacacttatactt
tcaacacatcttgcacgatcttatcatcacctgtttccgctcatgaactggattgaggtt
ccatggcaacgtgcctcacggagtttgacatgctttgcctgcggcatatatttccctacg
gtacctcctaaagatcagtggcaagctacggagtcccaggcaaaagggatgagtgtcagc
agtcgctatgagtgtacagtctgcaaaaatcacttctgtattgattgtgatctctttgct
catgaaattgtgcacaattgcccaggctgccaaagcgggattagtgggctagccattgct
gaccggcctaggggtcagactggcacagaggaaatggacacctcaacataa
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