Aspergillus fumigatus: AFUA_6G13410
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Entry
AFUA_6G13410 CDS
T01017
Name
(RefSeq) nuclear mRNA splicing factor
KO
K12830
splicing factor 3B subunit 3
Organism
afm
Aspergillus fumigatus
Pathway
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_6G13410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afm03021
]
AFUA_6G13410
03041 Spliceosome [BR:
afm03041
]
AFUA_6G13410
03036 Chromosome and associated proteins [BR:
afm03036
]
AFUA_6G13410
Transcription machinery [BR:
afm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
AFUA_6G13410
Spliceosome [BR:
afm03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
AFUA_6G13410
Complex B
AFUA_6G13410
Complex C
U2 SnRNP specific factors
AFUA_6G13410
Chromosome and associated proteins [BR:
afm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
AFUA_6G13410
TFTC complex
AFUA_6G13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
3508529
NCBI-ProteinID:
XP_751217
UniProt:
Q4WLI5
LinkDB
All DBs
Position
6:complement(3410327..3414441)
Genome browser
AA seq
1225 aa
AA seq
DB search
MATTSNMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKITPIY
SQDVFGIIRTLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTVVFAMTALD
VGYENPIFAALEVDYSEADQDPTGRAYEESEKLLVYYELDLGLNHVVRKWADPVDRTASM
LFQVPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRIGATENPERKRSIVAGVMHKM
RGAFFFLLQTEDGDLFKVTIDMVEDDNGQLTGEVKRLKIKYFDTVPIASSLLILKSGFLY
VASEAGNHHFYQFEKLGDDDEETEFNSENFPADLSVPCEPVFFQPRGAENLNLVETLNSL
NPLIDSKIVNLNEDDAPQIYTVSGSGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRADEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPRGI
RHILADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDADGTLAEYDERRQMS
GTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMS
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAV
LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQAQNLRIFSIEKL
DNNILQESIPLSNTPRRMLKHPEQPLFYVIESDNNVLSPATRARLIEDSKARNGETNVLP
PEDFGYPRATGHWASCIQIVDPLDAKAVISTIELEENEAAVSMAAVPFSSQDDETFLVVG
TAKDMIVNPPSSAGGFIHIYRFQEDGKELEFIHKTKVEEPPLALLGFQGRLLAGIGSTLR
IYDLGMKQLLRKCQAQVVSKTIVGLQTQGSRIVVSDVRESVTYVVYKYQDNILIPFVDDS
VSRWTTSTTMVDYETVAGGDKFGNLWLVRCPKKASEEADEDGSGAHLIHERGYLHGAPNR
LDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQL
ASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SVRYANEGSVLIILMAIPASVCKGL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacttcgaacatgttcatgtattccctgacgatccagcctccgactgcgatc
acacaagctattctgggccagtttgcagggactaaggagcaacagatcgtgacagcgtca
gggtcgaagctcacgattcatcgtcccgatccgactcagggcaagattacaccaatctat
tcccaggatgtcttcggtatcatccgtactctggcagcctttcggctggctggaagcagt
aaagattacataatcattggttcggactcgggacgtatcacgattattgaatatgttccc
tcccaaaatcggttcaaccgtatccatcttgagaccttcggcaagtccggtgttcgtcgt
gtcgttcctggtcagtaccttgcggtcgatccaaaaggtagagcttgtttgattgcctcc
gtggaaaagaataagctcgtttacgttctgaatcggaactcgcaggccgagctcacgatt
tcgtctcctctggaggcccacaagccgcagactgtggtctttgcgatgactgctctggat
gtcggctacgagaatcctatcttcgcggccctcgaggttgactattctgaggcggatcag
gatccaaccggtcgagcgtacgaagagtccgaaaaactgcttgtatattatgaacttgat
ctcggtctaaatcatgttgtccgcaagtgggccgatcctgttgaccgcacggcgtctatg
ctattccaggtgccgggaggtgccgatggtcccagtggtgtcttggtatgtgcagaggat
aacattacctaccggcactcaaaccaagatgcattcagagtcccgattcctcgacgcatt
ggtgcaactgaaaatcccgagcgcaagcgctctatcgtcgctggcgtcatgcacaagatg
aggggtgctttctttttccttcttcagactgaagatggcgacctgttcaaggttaccatt
gatatggtggaggatgacaacggacaactgactggcgaagttaagaggttgaagatcaaa
tattttgatacagtccctatcgcatccagtctgttgattctaaagagtggtttcctttac
gttgccagtgaagcaggaaaccatcacttctaccaattcgagaagctgggagacgacgac
gaagagactgaattcaacagtgaaaactttcctgcggatctctctgttccctgtgagccg
gtgttcttccaaccgagaggagctgaaaacctcaacctcgtcgagacgctcaactctctc
aaccctttgatcgatagtaagatcgtgaaccttaacgaggacgatgctcctcaaatctac
actgtgtctgggagtggcgcccggagcagcttcaggaccctcaagcacggtctggaagtc
tccgagattgtggaatcggagctccctagtgtgccttctgccgtttggactaccaagttg
actcgtgctgatgagtttgacgcttacattattctttctttcgcaaacggtactttggtt
ctcagcatcggtgagaccgttgaagaggtaaccgacaccggctttctttccactgcacct
actttggctgttcagcagctcggtgaggattcgctgattcaggttcacccgagaggcatt
cgtcatatccttgcagaccggcgtgtcaatgagtggcccgctcctcaacatcgttcgatt
gtcgctgctgcgacaaatgagcgtcaggtagcggttgccctcagctcaggtgaaatcgtg
tacttcgaaatggatgccgatggaacgctcgctgaatacgatgagagacgtcagatgtct
ggtacagtaacatgcctcagtttaggcgaggtgcctgaagggcgtgtgagaagttctttc
ttggctgtcggatgtgacgactctactgttcgcattctgagcttggatcccgactcgacc
ttggagaataagtcagtccaggctcttacctcggctccatcagcgttgaacatcatgtca
atggccgattcaagctcaggaggtacgacgctgtacctgcacattgggctctactccggt
gtctacctccgaactgttctcgacgaggtgactggtgaactttccgatactcgtacccgg
ttcctgggagctaagccagtcaagctattccgtgtttccgtcaaaggacaaacggctgtt
ctcgccctcagctcccgaccatggttgggctactccgacatccagacaaaaggtttcatg
ctcaccccgttggattacgtgggcttggaatggggctggaatttctccagtgagcagtgt
gttgaaggcatggttggtatccaggcacagaatcttcggattttctctatcgagaagttg
gacaacaacatactgcaggagtcaattcccctttcaaacacgccccgtcgtatgcttaag
catccagaacagccattgttctatgttatcgaatccgacaacaatgtcctatcgccggct
acgagagccaggctgatcgaagattccaaggcgcgtaatggcgagacaaacgttcttccg
cccgaagatttcggctatccacgggctacaggtcactgggcgtcttgtattcaaattgtc
gatcctctggatgccaaagccgtgatctcgacgattgaactcgaggagaacgaggccgcc
gtcagcatggcagcggtacccttctcgagccaggacgatgagacatttctggtggtggga
acggctaaggatatgattgtcaaccctccctcgtcagcgggaggtttcatccacatttac
aggtttcaagaagatgggaaggagctggagttcattcacaagacgaaggtggaagagcca
cctcttgctctcctcggattccagggacgtcttcttgccggcatcggctctacccttcgg
atctatgacttgggaatgaaacagctgctccggaaatgtcaggctcaggtggtgtcgaag
acgattgttgggctccagacacaaggtagccggattgttgtcagcgacgttcgcgaaagc
gtgacgtatgtcgtatacaagtaccaggataacatcttgattcctttcgttgatgattcc
gtttctcgctggacgacgagtaccaccatggtagactacgagactgttgccggtggtgac
aaatttggtaacctctggctcgtgcgctgtcccaagaaggcctcggaggaggcggatgag
gatggatcgggagcccatctgattcatgagcgcggttatctgcatggcgcaccgaatcgc
ctggatctgatgatccacacctacacacaagatatcccgactagcttgcacaagacacaa
ctcgtagcaggtggacgggatatccttgtgtggaccgggtttcagggtacaattggcatg
cttgtgcctttcgtgagccgcgaggatgtggactttttccagaacctagagatgcaacta
gcatcacagtgcccacccctcgccggacgggatcatctcatctatcgcagctattatgca
ccagtcaaaggtgttattgatggagatttgtgcgaaatgtatttcttactgcctaatgac
acgaagatgatgattgcagcggaactggatcgttccgtcagggagattgagcggaagatc
tcggtaagatatgcgaacgagggtagcgtactaataattctgatggcaattccggcgtct
gtgtgcaagggtctatag
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