Aptenodytes forsteri (emperor penguin): 103896269
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Entry
103896269 CDS
T08527
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03013
Nucleocytoplasmic transport
afor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103896269 (UPF3A)
03015 mRNA surveillance pathway
103896269 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103896269 (UPF3A)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103896269 (UPF3A)
mRNA cycle factors
P-body specific factors
103896269 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
103896269
NCBI-ProteinID:
XP_009274366
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLF
RDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAD
EEKICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELANEKHKEKGEEADT
EENKWDKSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDG
RKHRAYYEFDKFVRRNEEELKWGKGYSQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGARIRTHTASTSKTYDCSGKSFEDALDKKYEADNSAGGGSEKS
EEAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgttattcgacggcttcctccttgtctaactaaggagcaactggaggaacag
ctacatcctctacctgcccatgattattttgagttttgcactgctgatcccagcctttat
cctcatctctactcaagagcatacattaactttagaaatcctgaggacatccttcttttt
agagatcgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcagtg
gttgaatttgctccattccagaagatttcaaaaaagaagctgaaaaagaaagatgccaaa
gccgggagcattgaagacgatccagaatataggaaatttttagagagttactgtgctgat
gaagagaaaatctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagg
gaactcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaa
aagcagagaatacgagaagagaaaagagaagaacgaaggcgaagagaattggagaagaaa
cgtctgcgggaggaagagaaaaggaagcgcagagaagaagaaagacgtaaaagaaaagaa
gtggagaagcaaaagaagatttctgaaaaagaaataaggatcaagcttcttaagaagcct
gaaaaaggagatgagctggccaatgaaaagcacaaagaaaaaggtgaagaagctgacact
gaagaaaacaaatgggataaatcacctggatctgggagtataaaatccaaatcattggag
ggttcactaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagat
ttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggatgatggc
agaaagcatagagcttactatgagtttgacaagtttgtgagaaggaatgaagaagagctg
aagtgggggaaaggatacagccaagacagaggaaagaaagggaactacaactacagcttc
actgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcgcccagccatgcagttataccagccaggagctcgc
attcgaacacatacggcatctacaagtaaaacctatgactgcagcgggaaatcctttgaa
gatgctcttgataaaaagtatgaggcagataattcagctggaggtggttctgagaagagc
gaagaagcagaataa
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