Aptenodytes forsteri (emperor penguin): 103900015
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Entry
103900015 CDS
T08527
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afor03000
]
103900015 (RC3H2)
04121 Ubiquitin system [BR:
afor04121
]
103900015 (RC3H2)
Transcription factors [BR:
afor03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103900015 (RC3H2)
Ubiquitin system [BR:
afor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103900015 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
103900015
NCBI-ProteinID:
XP_009278871
UniProt:
A0A087R4L7
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTVINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEAAGKMVPSTNGIASLESGVPQLIPRCADTSLRALENTKKGGKTGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST
SSARYTERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTHVMSEDKNDFLKPVANGRMVNS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgtcatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacccgat
catcagacagtgaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggcaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagctggtgacgctggtgaattgt
cagctggtggaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag
agaacagttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtacaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttcgctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgctatggaagcaggacttcgaatatcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag
ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctgctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtcgct
gtaaagactgtggtacatggactggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatataaaacaagtatgtgccgagaccttcga
cagcaagggggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaataccgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaatgtaatttctgtcata
ggaagccctgaagcagcagggaagatggtgccaagtactaatggaatagctagtctagaa
agtggtgttccccaattgatccctcgctgtgcggacacctccttgagagctttggagaac
accaagaagggagggaagactggagccaatggccagaatgtttctggatcccctacagaa
tcactacctgaaaataaaatcggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccatttgttcccagagtacctgtctaccctccgcattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tattactctgtggcttgtcaacctccaaatgaacagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttacgatgagcaattaagacggaagccagagcaatgg
gcgcagtaccacacgcagaaaactcctctggtatcgtcaacccttcctatggcaacacca
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgctgtgttaatggatttggacagcggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagcgatgga
ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacaaca
gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagac
tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcagattctact
tcatcagcgcgttacacagaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctattgagtattgaattacagcaggccaaaagtaactca
ttattacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
accgattatactgaagactgtgcagacacaaagccagatcgagacattgaattggagctg
tcagcccttgatacagatgaacctgatgggcaaggtgaacaaatagaagagattctggat
atacagctaggtattagttctcaagatgatcagctgctcaatggaacaactgtagagaat
gggcatccactaaagcagcatcagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactcacgttatgtctgaggataaaaatgactttttaaag
cctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
