Alcaligenes faecalis JQ135: AFA_10480
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Entry
AFA_10480 CDS
T05446
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
afq
Alcaligenes faecalis JQ135
Pathway
afq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFA_10480 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afq03400
]
AFA_10480 (xth)
Enzymes [BR:
afq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AFA_10480 (xth)
DNA repair and recombination proteins [BR:
afq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AFA_10480 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
AbiEi_3
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ASR89839
UniProt:
A0A9N7HH93
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All DBs
Position
2271160..2271942
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AA seq
260 aa
AA seq
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MKLTTWNVNSLNVRLPQVLDWLAANPVDVLCLQELKLPDERFPLEAFQEMGYHAHWAGQK
TYNGVALISREPGTDVQRNLPNYEDPQQRLLAATYPSPDGPVRVICAYCPNGQSLESEKY
SYKLEWFAALHDWLEKELQQYPRLAILGDYNIAPADQDVHDPAKWADDVLVSPPERAAFE
RLLALGLHDAYRLFEQSGSPFTWWDYRRFAFRRDAGLRIDHALLSDALKTRCSACDIDRE
PRANEQPSDHAPVTATLSFT
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccacctggaacgtgaactccctgaacgtccgtcttcctcaagttctggac
tggctggccgccaaccccgtagacgtgctttgtctgcaagagctcaaactgcccgacgag
cgttttcctttggaggcttttcaggaaatgggatatcacgctcactgggcgggtcaaaaa
acctataacggcgtcgccctgatttcccgcgagccgggcacggatgtgcagcgcaatctg
cccaattacgaagacccgcagcaacgtctgctggccgccacctacccatcgcctgacggc
ccggtccgcgtgatttgtgcctactgccccaacgggcagtcgctcgagagcgaaaagtac
agctacaagctggaatggttcgccgccctgcacgactggttggaaaaagaattgcagcag
tatccccgtctggccatcctgggcgactataatattgccccagctgaccaggacgttcac
gaccctgccaagtgggccgatgatgttctggtctccccgcccgagcgggccgccttcgag
cgcttgctggcactgggcttgcatgacgcctatcgcctgtttgagcagagcggcagcccc
tttacctggtgggactatcgtcgttttgcattccgccgcgacgccggtttacgcattgac
catgccttgttgtccgatgcattgaaaacccgttgctcagcctgcgacattgaccgcgaa
ccgcgtgccaatgaacagccctcggatcatgcgcctgttaccgctactctgtcctttacc
tga
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