Acidithiobacillus ferrooxidans ATCC 23270: AFE_0208
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Entry
AFE_0208 CDS
T00810
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00470
D-Amino acid metabolism
afr00550
Peptidoglycan biosynthesis
afr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AFE_0208 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFE_0208 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afr01011
]
AFE_0208 (murD)
Enzymes [BR:
afr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AFE_0208 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
afr01011
]
Precursor biosynthesis
Amino acid ligase
AFE_0208 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ACK79052
UniProt:
B7J3V4
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All DBs
Position
complement(184551..185897)
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AA seq
448 aa
AA seq
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MDMNGKKAYILGMGKTGHSLLRTALRLGAHCRVADTRLLQDAADLRRRYPAVDFHFGDMP
EDLFLEADILLLSPGLAPSLPALVSARRAGIEILGDIELFGRITRAPIVAITGSNGKSTV
TTLVGEMARAAGLRAAVGGNLGTPALDLLPETGPEPDLYVLELSSFQLAACHDFHPRAAA
ILNLSPDHLDWHGDYAAYAAAKTRIFRAMGAGDTLVLNAGDTFTAALPPQVPAGVRVQFF
GGADEHDASIAGDRLCLRSDGPLLDLDQLPLRGAHNAENALAAALLARAMAVPVTAIRQA
LRTFPGLPHRLARIAEINGVSYYDDSKGTNLGATLKAMSGLPGPLVMILGGDAKGADLSP
LREACRGQRGVVVLGKDGPQISALLAGILPVESARNMAQAVEKAAVLAQRGDQVLLSPAC
ASTDMFTDYQDRGRQFAVAVRALTEDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaacgggaaaaaggcatacatcctcggcatgggcaagacgggacactccctc
ttgcgtacggccctgcgcctgggcgctcattgccgagtggccgacacgcgtctgctacaa
gacgccgccgacttgcggcgccgttatccagcagtcgattttcattttggtgacatgccc
gaggacctgtttctggaggcggatattcttctgctcagcccggggctggcgccgtcgctg
cccgctctcgtcagcgccagacgggccggcatcgaaattctgggcgatatcgaacttttt
ggccggatcacccgggcgcccatcgtcgcgatcaccggcagcaatggtaaaagcaccgtc
accaccctggtgggcgaaatggcacgggccgcggggctgcgcgccgccgtcggcggcaac
ctcggcactcccgccctcgaccttctgcccgaaacagggcccgagcccgatctctatgtc
ctcgagctttccagcttccagcttgcggcctgtcatgatttccaccctcgcgccgccgcc
attctcaacctgagcccggatcatctggactggcatggtgactatgcggcctatgctgcc
gcgaaaacccgcattttccgggcgatgggcgcaggggacacgctggtactgaacgccgga
gacacctttacggccgccctaccgccccaggtccctgcgggcgtgcgggtgcagttcttt
ggcggcgctgacgaacacgacgccagcatcgccggggaccggctctgcctgcgtagcgat
ggtcccctgctggatttggatcaactcccgctgcgcggcgcgcataacgccgaaaatgcg
ctggccgccgccctgctggcccgcgcgatggccgtccctgtgacggccatccgccaggcg
ttgcgtactttcccgggtctaccccaccgccttgcccggatcgccgagatcaacggagtg
agttactacgacgattccaagggcaccaacctgggcgcgaccctcaaagccatgtccggc
ttgccgggacccctggtgatgatactcggtggcgatgccaagggggccgacctgagcccc
ctgcgggaggcctgtcgcgggcagcgtggcgttgtcgtcctcggtaaggacgggccacaa
atctccgccctgctcgccggaatactgcccgtcgagagtgcccggaacatggctcaggct
gtcgagaaggcggcggtgctggcgcagcgtggcgatcaggtgctgctctcgcccgcctgc
gccagtaccgatatgtttaccgattatcaggatcgcggccgtcaattcgccgtggcggta
cgggccctgacggaggatctggcatga
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