Acidithiobacillus ferrooxidans ATCC 23270: AFE_2882
Help
Entry
AFE_2882 CDS
T00810
Name
(GenBank) uracil-DNA glycosylase family 4 protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_2882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_2882
Enzymes [BR:
afr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AFE_2882
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFE_2882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACK79971
UniProt:
B7J974
LinkDB
All DBs
Position
complement(2562800..2563726)
Genome browser
AA seq
308 aa
AA seq
DB search
MPDILSDKQRQFLQLLRMPVPGDPPPELAQAKTTATAADAAANRSVPAPSASEFVPTPLV
ETSVPRPPPVEEQPPVAGSVAPGTALPSSGTAPIPVSGTPPPVPADQASVTAVEAHRTAR
IATLDWRDLSNMVSTCQACPLGQTRKHAVFGAGNPHGSWLFVGEAPGAEEDRRGEAFVGR
AGQLLDNMLQAMGLSRDKDAYIANILKCRPPNNRDPLGPEVHACTPYLQRQIALLQPRVI
VALGRFAAQGLLQVNTPLSQLRGTTQHFQGIPLIVTYHPAYLLRNPIDKRKVWEDLKRAL
GVFAELQK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacatcctcagcgacaaacagcgccagttcctgcaacttttgcgcatgcccgtg
cccggcgatccgccgccggagctggcgcaggccaaaacgacggcaaccgccgctgatgcc
gcagcgaaccgatctgtacctgcgccatcagcgtcggagtttgttccgacgccccttgtg
gagacgtccgtgccgcgcccgccccccgtcgaagaacagcccccggtagcaggtagcgta
gcaccaggcacggcactcccatcctcagggaccgcccccattccggtcagcggcacaccg
ccgccggtacctgctgatcaggccagcgtcactgcggtggaggcgcatcgcaccgcccgc
atcgccaccctggactggcgtgacctcagtaacatggtcagtacctgtcaggcctgcccc
ttgggccaaacccgcaaacatgccgtattcggtgcgggcaacccgcacgggtcctggctc
tttgtcggcgaggcgccgggcgcggaagaagaccgccgcggcgaagcctttgtgggtcgt
gccggtcaactcctcgacaacatgctccaggccatgggcctgagtcgcgacaaagacgcc
tacattgccaatatcctcaaatgccgcccccccaacaaccgtgatccgctgggtccggaa
gtgcatgcctgcacgccctatctgcagcgccagatcgcgcttttacagccgcgtgtgatc
gttgccctgggacgctttgctgcgcagggcttgcttcaggtgaatacgccgctcagccaa
ctgcgtggcaccacccagcacttccaaggcattcccctgattgtcacctaccaccccgcc
tatctgttgcgtaaccccatcgacaagcgcaaggtctgggaggatctgaagcgggcgttg
ggggtgtttgcggagttgcagaaataa
DBGET
integrated database retrieval system
